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3DXV

The crystal structure of alpha-amino-epsilon-caprolactam racemase from Achromobacter obae

Functional Information from GO Data
ChainGOidnamespacecontents
A0016853molecular_functionisomerase activity
A0030170molecular_functionpyridoxal phosphate binding
A0047463molecular_function2-aminohexano-6-lactam racemase activity
B0016853molecular_functionisomerase activity
B0030170molecular_functionpyridoxal phosphate binding
B0047463molecular_function2-aminohexano-6-lactam racemase activity
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE PLP A 450
ChainResidue
ASER109
AHOH455
AHOH460
BGLN294
BTHR295
AGLY110
ASER111
ATYR137
AHIS138
AGLU205
AASP238
ALYS241
ALYS267

site_idAC2
Number of Residues15
DetailsBINDING SITE FOR RESIDUE PLP B 450
ChainResidue
AGLN294
ATHR295
AHOH451
BSER109
BGLY110
BSER111
BTYR137
BHIS138
BGLU205
BSER209
BASP238
BLYS241
BLYS267
BHOH456
BHOH462

Functional Information from PROSITE/UniProt
site_idPS00600
Number of Residues38
DetailsAA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. VVcDEVkv.GLaRsGrlhcfehegfvp....DILvlGKglgGG
ChainResidueDetails
AVAL235-GLY272

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"evidences":[{"source":"PubMed","id":"19146406","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues2
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"19146406","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsModified residue: {"description":"N6-(pyridoxal phosphate)lysine"}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
AASP238
ATYR137
ALYS267

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
BASP238
BTYR137
BLYS267

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
AASP238
ATYR137

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
BASP238
BTYR137

site_idCSA5
Number of Residues1
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
AALA80

site_idCSA6
Number of Residues1
DetailsAnnotated By Reference To The Literature 1cl1
ChainResidueDetails
BALA80

246704

PDB entries from 2025-12-24

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