3DPJ
The crystal structure of a TetR transcription regulator from Silicibacter pomeroyi DSS
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0009889 | biological_process | regulation of biosynthetic process |
| A | 0080090 | biological_process | regulation of primary metabolic process |
| B | 0003677 | molecular_function | DNA binding |
| B | 0009889 | biological_process | regulation of biosynthetic process |
| B | 0080090 | biological_process | regulation of primary metabolic process |
| C | 0003677 | molecular_function | DNA binding |
| C | 0009889 | biological_process | regulation of biosynthetic process |
| C | 0080090 | biological_process | regulation of primary metabolic process |
| D | 0003677 | molecular_function | DNA binding |
| D | 0009889 | biological_process | regulation of biosynthetic process |
| D | 0080090 | biological_process | regulation of primary metabolic process |
| E | 0003677 | molecular_function | DNA binding |
| E | 0009889 | biological_process | regulation of biosynthetic process |
| E | 0080090 | biological_process | regulation of primary metabolic process |
| F | 0003677 | molecular_function | DNA binding |
| F | 0009889 | biological_process | regulation of biosynthetic process |
| F | 0080090 | biological_process | regulation of primary metabolic process |
| G | 0003677 | molecular_function | DNA binding |
| G | 0009889 | biological_process | regulation of biosynthetic process |
| G | 0080090 | biological_process | regulation of primary metabolic process |
| H | 0003677 | molecular_function | DNA binding |
| H | 0009889 | biological_process | regulation of biosynthetic process |
| H | 0080090 | biological_process | regulation of primary metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MES A 192 |
| Chain | Residue |
| A | ASP15 |
| A | ARG60 |
| A | ARG63 |
| A | THR64 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MES B 192 |
| Chain | Residue |
| B | GLU16 |
| B | TYR19 |
| B | ARG60 |
| B | ARG63 |
| B | PRO102 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MES C 192 |
| Chain | Residue |
| C | ASP15 |
| C | ARG60 |
| C | ARG63 |
| C | THR64 |
| C | PRO102 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MES D 192 |
| Chain | Residue |
| D | ASP15 |
| D | TYR19 |
| D | ARG60 |
| D | ARG63 |
| D | PRO102 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MES E 192 |
| Chain | Residue |
| E | ASP15 |
| E | ARG60 |
| E | ARG63 |
| E | PRO102 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE MES G 192 |
| Chain | Residue |
| G | ASP15 |
| G | ARG60 |
| G | ARG63 |
| G | PRO102 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MES H 192 |
| Chain | Residue |
| H | ASP15 |
| H | TYR19 |
| H | ARG60 |
| H | ASN92 |
| H | LYS95 |
| H | PRO102 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MES F 192 |
| Chain | Residue |
| F | ASP15 |
| F | TYR19 |
| F | ARG60 |
| F | ARG63 |
| F | LYS95 |
| F | PRO102 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO B 193 |
| Chain | Residue |
| B | ASP87 |
| site_id | BC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 193 |
| Chain | Residue |
| C | LEU61 |
| C | GLY119 |
| C | GLN120 |
| C | GLY123 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO F 193 |
| Chain | Residue |
| F | SER27 |
| F | PHE28 |
| F | LYS49 |
| G | THR191 |
| site_id | BC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO H 193 |
| Chain | Residue |
| E | THR191 |
| H | SER27 |
| H | PHE28 |
| H | LYS49 |
| site_id | BC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO H 194 |
| Chain | Residue |
| H | LEU88 |
| H | ASN92 |
| H | ILE96 |
| site_id | BC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 194 |
| Chain | Residue |
| B | ASP178 |
| B | ARG181 |
| B | ASN185 |
| site_id | BC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO C 194 |
| Chain | Residue |
| C | ARG63 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO D 193 |
| Chain | Residue |
| D | SER27 |
| D | PHE28 |
| D | LYS49 |
| site_id | BC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO C 195 |
| Chain | Residue |
| C | ASP30 |
| C | ALA33 |
| C | ALA34 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 196 |
| Chain | Residue |
| C | ARG93 |
| C | GLU169 |
| C | ARG173 |
| H | ARG173 |
| H | SER174 |
| site_id | CC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO H 195 |
| Chain | Residue |
| H | ARG93 |
| H | ARG173 |
| site_id | CC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO E 193 |
| Chain | Residue |
| E | ASP130 |
| E | GLN133 |
| E | ARG134 |
| site_id | CC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 194 |
| Chain | Residue |
| D | ARG129 |
| D | GLN133 |
| D | PRO146 |
| D | ALA147 |
| site_id | CC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 195 |
| Chain | Residue |
| D | LEU88 |
| D | ASN92 |
| D | ILE96 |
| D | PRO102 |
| site_id | CC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO E 194 |
| Chain | Residue |
| D | GLY170 |
| E | ARG173 |
| E | SER174 |
| site_id | CC6 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO D 196 |
| Chain | Residue |
| D | LEU61 |
| D | ALA62 |
| site_id | CC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO C 197 |
| Chain | Residue |
| C | LYS47 |
| site_id | CC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO H 196 |
| Chain | Residue |
| H | LEU61 |
| H | GLY119 |
| H | GLN120 |
| H | GLY123 |
| site_id | CC9 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO H 197 |
| Chain | Residue |
| H | ASP30 |
| site_id | DC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO C 198 |
| Chain | Residue |
| C | THR48 |
| C | ASP50 |
| C | GLU51 |
| site_id | DC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO F 194 |
| Chain | Residue |
| F | ARG181 |
| F | ALA177 |
| F | HIS180 |
| site_id | DC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO H 198 |
| Chain | Residue |
| G | GLU109 |
| G | LYS112 |
| H | GLU109 |
| site_id | DC4 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE EDO C 199 |
| Chain | Residue |
| C | GLN21 |
| C | ASP30 |
| site_id | DC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE EDO H 199 |
| Chain | Residue |
| H | ALA24 |
| site_id | DC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO F 195 |
| Chain | Residue |
| F | LEU88 |
| F | ASN92 |
| F | ILE96 |
| site_id | DC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO B 195 |
| Chain | Residue |
| B | SER27 |
| B | PHE28 |
| B | LYS49 |
| site_id | DC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 193 |
| Chain | Residue |
| A | GLU169 |
| A | ARG173 |
| F | ARG173 |
| site_id | DC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO F 196 |
| Chain | Residue |
| F | ASP168 |
| F | PHE171 |
| F | SER174 |
