3DLU
Structures of SRP54 and SRP19, the two proteins assembling the ribonucleic core of the Signal Recognition Particle from the archaeon Pyrococcus furiosus.
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006612 | biological_process | protein targeting to membrane |
| A | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
| A | 0008312 | molecular_function | 7S RNA binding |
| A | 0048500 | cellular_component | signal recognition particle |
| A | 1990904 | cellular_component | ribonucleoprotein complex |
| B | 0003723 | molecular_function | RNA binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006612 | biological_process | protein targeting to membrane |
| B | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
| B | 0008312 | molecular_function | 7S RNA binding |
| B | 0048500 | cellular_component | signal recognition particle |
| B | 1990904 | cellular_component | ribonucleoprotein complex |
| C | 0003723 | molecular_function | RNA binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006612 | biological_process | protein targeting to membrane |
| C | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
| C | 0008312 | molecular_function | 7S RNA binding |
| C | 0048500 | cellular_component | signal recognition particle |
| C | 1990904 | cellular_component | ribonucleoprotein complex |
| D | 0003723 | molecular_function | RNA binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006612 | biological_process | protein targeting to membrane |
| D | 0006614 | biological_process | SRP-dependent cotranslational protein targeting to membrane |
| D | 0008312 | molecular_function | 7S RNA binding |
| D | 0048500 | cellular_component | signal recognition particle |
| D | 1990904 | cellular_component | ribonucleoprotein complex |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR C 107 |
| Chain | Residue |
| C | GLY80 |
| C | LYS83 |
| site_id | AC2 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 107 |
| Chain | Residue |
| A | TRP7 |
| site_id | AC3 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR D 107 |
| Chain | Residue |
| D | TRP7 |
| site_id | AC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR C 108 |
| Chain | Residue |
| C | TRP7 |
| site_id | AC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 108 |
| Chain | Residue |
| A | GLU30 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR C 109 |
| Chain | Residue |
| C | ARG3 |
| C | PHE4 |
| D | GLY20 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR C 112 |
| Chain | Residue |
| C | PHE4 |
| D | GLU10 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE BR A 110 |
| Chain | Residue |
| A | ARG25 |
| A | SER26 |
| A | ALA28 |
| A | ARG93 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR B 107 |
| Chain | Residue |
| A | TRP7 |
| A | GLU10 |
| B | PHE4 |
| site_id | BC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR D 111 |
| Chain | Residue |
| D | ARG17 |
| D | ARG21 |
| site_id | BC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE BR A 113 |
| Chain | Residue |
| A | GLY20 |
| A | ILE22 |
| B | ARG3 |
| B | PHE4 |
| site_id | BC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR A 115 |
| Chain | Residue |
| A | LYS45 |
| B | SER77 |
| B | PRO78 |
| site_id | BC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR C 113 |
| Chain | Residue |
| C | LEU87 |
| C | GLN90 |
| site_id | BC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 117 |
| Chain | Residue |
| A | ARG17 |
| site_id | BC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR A 118 |
| Chain | Residue |
| A | SER77 |
| A | PRO78 |
| site_id | BC8 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 119 |
| Chain | Residue |
| A | SER9 |
| site_id | BC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR A 120 |
| Chain | Residue |
| A | SER9 |
| A | ASP12 |
| site_id | CC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR A 121 |
| Chain | Residue |
| A | SER16 |
| A | ARG17 |
| A | LYS18 |
| site_id | CC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR C 114 |
| Chain | Residue |
| C | SER82 |
| C | LYS83 |
| C | LYS86 |
| site_id | CC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR A 122 |
| Chain | Residue |
| A | ARG25 |
| A | SER26 |
| site_id | CC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE BR D 112 |
| Chain | Residue |
| B | SER26 |
| D | ILE27 |
| D | GLN90 |
| site_id | CC5 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE BR B 108 |
| Chain | Residue |
| A | ARG50 |
| B | TRP7 |
| site_id | CC6 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 124 |
| Chain | Residue |
| A | SER26 |
| site_id | CC7 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE BR A 125 |
| Chain | Residue |
| A | ARG96 |
| site_id | CC9 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MLI C 1001 |
| Chain | Residue |
| C | ARG93 |
| C | ARG96 |
| C | ARG97 |
| D | SER13 |
| D | ARG14 |
| D | ARG25 |
