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3DK9

Catalytic cycle of human glutathione reductase near 1 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004362molecular_functionglutathione-disulfide reductase (NADPH) activity
A0005737cellular_componentcytoplasm
A0005739cellular_componentmitochondrion
A0005759cellular_componentmitochondrial matrix
A0005829cellular_componentcytosol
A0006749biological_processglutathione metabolic process
A0009055molecular_functionelectron transfer activity
A0009897cellular_componentexternal side of plasma membrane
A0016491molecular_functionoxidoreductase activity
A0016668molecular_functionoxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
A0034599biological_processcellular response to oxidative stress
A0045454biological_processcell redox homeostasis
A0050660molecular_functionflavin adenine dinucleotide binding
A0050661molecular_functionNADP binding
A0070062cellular_componentextracellular exosome
A0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 480
ChainResidue
AALA195
AHOH2125
AARG218
AHIS219
AARG224
ASO4482
AHOH1023
AHOH1113
AHOH1296
AHOH1323

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SO4 A 481
ChainResidue
AALA34
AARG37
AARG347
AHOH1022
AHOH1091
AHOH1158
AHOH1190
AHOH1191
AHOH1287
AHOH1434
AHOH2795

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SO4 A 482
ChainResidue
AARG218
AHIS219
ATHR257
ALEU258
ASO4480
AHOH1321
AHOH1323
AHOH1360
AHOH1407
AHOH1640

site_idAC4
Number of Residues39
DetailsBINDING SITE FOR RESIDUE FAD A 479
ChainResidue
AGLY27
AGLY29
ASER30
AGLY31
AGLU50
ASER51
ALYS53
AGLY56
ATHR57
ACYS58
AGLY62
ACYS63
ALYS66
AGLY128
AHIS129
AALA130
AALA155
ATHR156
AGLY157
ATYR197
AARG291
AASN294
ALEU298
AGLY330
AASP331
ALEU337
ALEU338
ATHR339
APRO340
AHIS467
APRO468
AHOH1001
AHOH1002
AHOH1007
AHOH1024
AHOH1063
AHOH1084
AHOH1269
AHOH1425

Functional Information from PROSITE/UniProt
site_idPS00076
Number of Residues11
DetailsPYRIDINE_REDOX_1 Pyridine nucleotide-disulphide oxidoreductases class-I active site. GGtCVnvGCVP
ChainResidueDetails
AGLY55-PRO65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS467

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AGLU50

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P47791
ChainResidueDetails
ALYS53

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 6
ChainResidueDetails
ACYS58electrofuge, electrophile, nucleofuge, nucleophile
ACYS63electrofuge, electrophile, hydrogen bond acceptor, hydrogen bond donor, nucleofuge, nucleophile, proton acceptor, proton donor
ALYS66activator, electrostatic stabiliser, hydrogen bond donor
ATYR197activator
AGLU201activator, electrostatic stabiliser, hydrogen bond acceptor
AHIS467hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AGLU472activator, electrostatic stabiliser, hydrogen bond acceptor

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PDB entries from 2024-05-29

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