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3DDL

Crystallographic Structure of Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore

Functional Information from GO Data
ChainGOidnamespacecontents
A0006811biological_processmonoatomic ion transport
A0007602biological_processphototransduction
A0009881molecular_functionphotoreceptor activity
A0010461molecular_functionlight-activated monoatomic ion channel activity
A0016020cellular_componentmembrane
A0034220biological_processmonoatomic ion transmembrane transport
B0006811biological_processmonoatomic ion transport
B0007602biological_processphototransduction
B0009881molecular_functionphotoreceptor activity
B0010461molecular_functionlight-activated monoatomic ion channel activity
B0016020cellular_componentmembrane
B0034220biological_processmonoatomic ion transmembrane transport
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE SXN A1401
ChainResidue
ALEU148
AMET211
AUNL1408
AGLY156
ATHR160
AARG184
AASN191
ALEU194
AALA198
ATYR207
AMET208

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL A1402
ChainResidue
AMET19
AILE234

site_idAC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNL A1403
ChainResidue
APRO139

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL A1404
ChainResidue
ALEU36
BLEU154

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL A1405
ChainResidue
ASER21
APHE22
BUNL1403

site_idAC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNL A1406
ChainResidue
APHE202

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL A1407
ChainResidue
ATYR168
APHE171

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL A1408
ChainResidue
AGLY242
AASN249
ASXN1401

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL A1409
ChainResidue
AVAL164
ATYR168

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE RET A1301
ChainResidue
ATRP97
AVAL101
AMET133
ASER159
APHE163
ATRP200
ATYR203
AASP236
AALA239
ALYS240

site_idBC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SXN B1401
ChainResidue
BLEU148
BGLY156
BTHR160
BARG184
BASN191
BLEU194
BALA198
BTYR207
BMET211
BPCW1416

site_idBC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL B1402
ChainResidue
AGLY11
BPRO102
BPHE128

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL B1403
ChainResidue
AUNL1405
BLYS125
BTRP165

site_idBC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL B1404
ChainResidue
BTHR28
BGLY60

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL B1405
ChainResidue
BLEU148
BGLY153
BLEU154

site_idBC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNL B1406
ChainResidue
BPHE202

site_idBC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNL B1408
ChainResidue
BLEU197

site_idBC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE UNL B1409
ChainResidue
ALEU136
BVAL32
BUNL1412

site_idCC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL B1410
ChainResidue
BVAL164
BTRP165

site_idCC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE UNL B1411
ChainResidue
BPX41415

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE UNL B1412
ChainResidue
BVAL24
BTHR67
BGLU71
BUNL1409

site_idCC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE UNL B1413
ChainResidue
BMET50
BPHE57

site_idCC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE RET B1301
ChainResidue
BTRP97
BVAL101
BMET133
BSER159
BTRP200
BTYR203
BASP236
BALA239
BLYS240

site_idCC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PX4 B1415
ChainResidue
AVAL106
AGLY120
AALA123
APHE128
BTHR9
BGLY11
BUNL1411
BPCW1416

site_idCC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PCW B1416
ChainResidue
BGLY242
BLEU246
BSXN1401
BPX41415

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PDB entries from 2024-09-04

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