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3D2G

Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch

Functional Information from PDB Data
site_id1
Number of Residues
Details
ChainResidue

site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 78
ChainResidue
BG48
BG66
BTPP83
BHOH84
BHOH85
BHOH86

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 79
ChainResidue
BHOH87
BHOH88
BHOH89
AHOH84
BC51
BA52

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 78
ChainResidue
ATPP83
AHOH89
AHOH90
AHOH91
AHOH92

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 79
ChainResidue
AG48
AG66
ATPP83
AHOH93
AHOH94
AHOH95

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 80
ChainResidue
AC51
AA52
AHOH96
AHOH97
AHOH98
BHOH90

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 80
ChainResidue
BU63
BTPP83
BHOH91
BHOH92
BHOH93
BHOH94

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG A 82
ChainResidue
AG42
AC65
AC67
AHOH85
AHOH86
AHOH87
AHOH88

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 81
ChainResidue
AA29
AHOH99
AHOH100
AHOH101
AHOH132
AHOH158

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MG B 81
ChainResidue
BA29
BHOH102
BHOH104

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 82
ChainResidue
BC67
BC67
BHOH95
BHOH95
BHOH96
BHOH96

site_idBC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE TPP A 83
ChainResidue
AG11
AG28
AG30
AA31
AC45
AG60
AC61
AC65
AG66
AMG78
AMG79
AHOH89
AHOH91
AHOH92
AHOH93
AHOH95
AHOH119

site_idBC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE TPP B 83
ChainResidue
BG11
BU12
BG28
BG30
BA31
BC45
BG60
BC61
BC65
BG66
BMG78
BMG80
BHOH84
BHOH85
BHOH93
BHOH94
BHOH98
BHOH112

227344

PDB entries from 2024-11-13

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