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3CZT

Crystal Structure of S100B in the Calcium and Zinc Loaded State at pH 9

Functional Information from GO Data
ChainGOidnamespacecontents
X0001726cellular_componentruffle
X0005509molecular_functioncalcium ion binding
X0005515molecular_functionprotein binding
X0005576cellular_componentextracellular region
X0005615cellular_componentextracellular space
X0005634cellular_componentnucleus
X0005654cellular_componentnucleoplasm
X0005737cellular_componentcytoplasm
X0005829cellular_componentcytosol
X0007155biological_processcell adhesion
X0007409biological_processaxonogenesis
X0007417biological_processcentral nervous system development
X0007611biological_processlearning or memory
X0007613biological_processmemory
X0008270molecular_functionzinc ion binding
X0008284biological_processpositive regulation of cell population proliferation
X0042802molecular_functionidentical protein binding
X0042803molecular_functionprotein homodimerization activity
X0043025cellular_componentneuronal cell body
X0043123biological_processpositive regulation of canonical NF-kappaB signal transduction
X0043231cellular_componentintracellular membrane-bounded organelle
X0044548molecular_functionS100 protein binding
X0045666biological_processpositive regulation of neuron differentiation
X0046872molecular_functionmetal ion binding
X0048156molecular_functiontau protein binding
X0048168biological_processregulation of neuronal synaptic plasticity
X0048306molecular_functioncalcium-dependent protein binding
X0048471cellular_componentperinuclear region of cytoplasm
X0050786molecular_functionRAGE receptor binding
X0097490biological_processsympathetic neuron projection extension
X1990138biological_processneuron projection extension
X1990845biological_processadaptive thermogenesis
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA X 92
ChainResidue
XSER18
XGLU21
XASP23
XLYS26
XGLU31
XHOH120

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA X 93
ChainResidue
XGLU67
XGLU72
XHOH104
XASP61
XASP63
XASP65

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CA X 94
ChainResidue
XHOH126
XHOH135
XHOH161
XHOH187

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN X 95
ChainResidue
XHIS15
XHIS25
XHIS85
XHIS90

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA X 92
ChainResidue
XSER18
XGLU21
XASP23
XLYS26
XGLU31
XHOH120

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA X 93
ChainResidue
XASP61
XASP63
XASP65
XGLU67
XGLU72
XHOH104

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CA X 94
ChainResidue
XHOH126
XHOH126
XHOH135
XHOH135
XHOH161
XHOH161
XHOH187
XHOH187

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN X 95
ChainResidue
XHIS15
XHIS25
XHIS85
XHIS90

Functional Information from PROSITE/UniProt
site_idPS00018
Number of Residues13
DetailsEF_HAND_1 EF-hand calcium-binding domain. DNDGDGECDfqEF
ChainResidueDetails
XASP61-PHE73

site_idPS00303
Number of Residues22
DetailsS100_CABP S-100/ICaBP type calcium binding protein signature. VMetLDndgDgecDFqEFmaFV
ChainResidueDetails
XVAL56-VAL77

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:20950652, ECO:0007744|PDB:3CZT
ChainResidueDetails
XHIS15
XHIS25
XHIS85
XHIS90

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING: BINDING => ECO:0000269|PubMed:20950652, ECO:0007744|PDB:3CZT, ECO:0007744|PDB:3D0Y, ECO:0007744|PDB:3D10
ChainResidueDetails
XSER18
XGLU21
XASP23
XLYS26
XGLU31

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00448, ECO:0000269|PubMed:20950652, ECO:0007744|PDB:3CZT, ECO:0007744|PDB:3D0Y, ECO:0007744|PDB:3D10
ChainResidueDetails
XASP61
XASP65
XGLU67
XGLU72

site_idSWS_FT_FI4
Number of Residues1
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00448, ECO:0000269|PubMed:20950652, ECO:0007744|PDB:2H61, ECO:0007744|PDB:3CZT, ECO:0007744|PDB:3D0Y, ECO:0007744|PDB:3D10
ChainResidueDetails
XASP63

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: N-acetylserine; alternate => ECO:0000250|UniProtKB:P02638
ChainResidueDetails
XSER1

222926

PDB entries from 2024-07-24

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