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3CP8

Crystal structure of GidA from Chlorobium tepidum

Functional Information from GO Data
ChainGOidnamespacecontents
A0002098biological_processtRNA wobble uridine modification
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0008033biological_processtRNA processing
A0030488biological_processtRNA methylation
A0050660molecular_functionflavin adenine dinucleotide binding
B0002098biological_processtRNA wobble uridine modification
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0008033biological_processtRNA processing
B0030488biological_processtRNA methylation
B0050660molecular_functionflavin adenine dinucleotide binding
C0002098biological_processtRNA wobble uridine modification
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0008033biological_processtRNA processing
C0030488biological_processtRNA methylation
C0050660molecular_functionflavin adenine dinucleotide binding
D0002098biological_processtRNA wobble uridine modification
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0008033biological_processtRNA processing
D0030488biological_processtRNA methylation
D0050660molecular_functionflavin adenine dinucleotide binding
Functional Information from PDB Data
site_idAC1
Number of Residues25
DetailsBINDING SITE FOR RESIDUE FAD A 622
ChainResidue
AGLY8
ALYS51
AASP118
ATHR119
AALA149
ACYS150
AGLY151
APHE153
AARG169
ATHR195
AGLY196
AALA9
AGLY365
AGLN366
AGLY372
ATYR373
AGLU374
AALA376
AGLY10
AHIS11
AALA12
ATHR31
ASER32
ASER41
ACYS42

site_idAC2
Number of Residues26
DetailsBINDING SITE FOR RESIDUE FAD B 622
ChainResidue
BGLY8
BALA9
BGLY10
BHIS11
BALA12
BTHR31
BSER32
BSER41
BCYS42
BASN43
BLYS51
BASP118
BTHR119
BALA149
BCYS150
BGLY151
BPHE153
BARG169
BTHR195
BGLY196
BGLY365
BGLN366
BGLY372
BTYR373
BGLU374
BALA376

site_idAC3
Number of Residues26
DetailsBINDING SITE FOR RESIDUE FAD C 622
ChainResidue
CGLY8
CALA9
CGLY10
CHIS11
CALA12
CILE30
CTHR31
CSER32
CSER41
CCYS42
CLYS51
CASP118
CTHR119
CALA149
CCYS150
CGLY151
CPHE153
CARG169
CTHR195
CGLY196
CGLY365
CGLN366
CGLY372
CTYR373
CGLU374
CALA376

site_idAC4
Number of Residues26
DetailsBINDING SITE FOR RESIDUE FAD D 622
ChainResidue
DGLY372
DTYR373
DGLU374
DALA376
DGLY8
DALA9
DGLY10
DHIS11
DALA12
DTHR31
DSER32
DSER41
DCYS42
DASN43
DLYS51
DASP118
DTHR119
DALA149
DCYS150
DGLY151
DPHE153
DARG169
DTHR195
DGLY196
DGLY365
DGLN366

Functional Information from PROSITE/UniProt
site_idPS01280
Number of Residues15
DetailsGIDA_1 Glucose inhibited division protein A family signature 1. GPrYCPSIEdKIsRF
ChainResidueDetails
AGLY269-PHE283

site_idPS01281
Number of Residues24
DetailsGIDA_2 Glucose inhibited division protein A family signature 2. AGQiNGtsGYeEAAAQGLMAGINA
ChainResidueDetails
AALA364-ALA387

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:18565343
ChainResidueDetails
AGLY8
DGLY8
DVAL120
DGLN366
AVAL120
AGLN366
BGLY8
BVAL120
BGLN366
CGLY8
CVAL120
CGLN366

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255
ChainResidueDetails
AGLY269
BGLY269
CGLY269
DGLY269

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
ACYS42
AVAL37

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
BCYS42
BVAL37

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
CCYS42
CVAL37

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1get
ChainResidueDetails
DCYS42
DVAL37

224004

PDB entries from 2024-08-21

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