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3CBI

Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic acid at 3.1 A resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0004623molecular_functionphospholipase A2 activity
A0005509molecular_functioncalcium ion binding
A0005543molecular_functionphospholipid binding
A0005576cellular_componentextracellular region
A0006629biological_processlipid metabolic process
A0006644biological_processphospholipid metabolic process
A0016042biological_processlipid catabolic process
A0016787molecular_functionhydrolase activity
A0035821biological_processmodulation of process of another organism
A0042130biological_processnegative regulation of T cell proliferation
A0046872molecular_functionmetal ion binding
A0050482biological_processarachidonate secretion
A0090729molecular_functiontoxin activity
B0004623molecular_functionphospholipase A2 activity
B0005509molecular_functioncalcium ion binding
B0005543molecular_functionphospholipid binding
B0005576cellular_componentextracellular region
B0006629biological_processlipid metabolic process
B0006644biological_processphospholipid metabolic process
B0016042biological_processlipid catabolic process
B0016787molecular_functionhydrolase activity
B0035821biological_processmodulation of process of another organism
B0042130biological_processnegative regulation of T cell proliferation
B0046872molecular_functionmetal ion binding
B0050482biological_processarachidonate secretion
B0090729molecular_functiontoxin activity
C0004623molecular_functionphospholipase A2 activity
C0005509molecular_functioncalcium ion binding
C0005543molecular_functionphospholipid binding
C0005576cellular_componentextracellular region
C0006629biological_processlipid metabolic process
C0006644biological_processphospholipid metabolic process
C0016042biological_processlipid catabolic process
C0016787molecular_functionhydrolase activity
C0035821biological_processmodulation of process of another organism
C0042130biological_processnegative regulation of T cell proliferation
C0046872molecular_functionmetal ion binding
C0050482biological_processarachidonate secretion
C0090729molecular_functiontoxin activity
D0004623molecular_functionphospholipase A2 activity
D0005509molecular_functioncalcium ion binding
D0005543molecular_functionphospholipid binding
D0005576cellular_componentextracellular region
D0006629biological_processlipid metabolic process
D0006644biological_processphospholipid metabolic process
D0016042biological_processlipid catabolic process
D0016787molecular_functionhydrolase activity
D0035821biological_processmodulation of process of another organism
D0042130biological_processnegative regulation of T cell proliferation
D0046872molecular_functionmetal ion binding
D0050482biological_processarachidonate secretion
D0090729molecular_functiontoxin activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE AJM C 201
ChainResidue
CTRP31
CGLY32
CGLY33
CASP49

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE AJM B 202
ChainResidue
BGLY30
BTRP31
BASP49

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE AJM A 203
ChainResidue
AGLY33
AASP49
ATRP31
AGLY32

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE AJM D 204
ChainResidue
DTRP31
DGLY33
DASP49

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ANN C 347
ChainResidue
CPHE5
CILE19
CTYR22
CSER23
CGLY30
CLYS69

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ANN B 348
ChainResidue
BLEU2
BSER23
BLYS69
CLYS116

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ANN A 349
ChainResidue
APHE5
ATYR22
AGLY30
ACYS45
AHIS48
ALYS69

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ANN D 350
ChainResidue
BGLU11
DPHE5
DTYR22
DSER23
DGLY30
DLYS69

Functional Information from PROSITE/UniProt
site_idPS00118
Number of Residues8
DetailsPA2_HIS Phospholipase A2 histidine active site. CCFvHDcC
ChainResidueDetails
ACYS44-CYS51

site_idPS00119
Number of Residues11
DetailsPA2_ASP Phospholipase A2 aspartic acid active site. ICECDKAAaIC
ChainResidueDetails
AILE95-CYS105

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsActive site: {"evidences":[{"source":"UniProtKB","id":"P14418","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues16
DetailsBinding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"MAY-2004","submissionDatabase":"PDB data bank","title":"Crystal structure of a complex formed between group II phospholipase A2 and aspirin at 1.86 A resolution.","authors":["Singh N.","Jabeen T.","Sharma S.","Bhushan A.","Singh T.P."]}},{"source":"PDB","id":"1TGM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1n29
ChainResidueDetails
AHIS48
AGLY30
AASP99

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1n29
ChainResidueDetails
BHIS48
BGLY30
BASP99

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1n29
ChainResidueDetails
CHIS48
CGLY30
CASP99

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1n29
ChainResidueDetails
DHIS48
DGLY30
DASP99

246905

PDB entries from 2025-12-31

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