3BNH

W. succinogenes NrfA Y218F Nitrite Complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005509	molecular_function	calcium ion binding
A	0009061	biological_process	anaerobic respiration
A	0016491	molecular_function	oxidoreductase activity
A	0019645	biological_process	anaerobic electron transport chain
A	0020037	molecular_function	heme binding
A	0030288	cellular_component	outer membrane-bounded periplasmic space
A	0042128	biological_process	nitrate assimilation
A	0042279	molecular_function	nitrite reductase (cytochrome, ammonia-forming) activity
A	0042597	cellular_component	periplasmic space
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NO2 A 1

Chain	Residue
A	ARG114
A	PHE218
A	HIS277
A	HOH518
A	HOH519

---

site_id	AC2
Number of Residues	6
Details	BINDING SITE FOR RESIDUE CA A 508

Chain	Residue
A	HOH601
A	HOH714
A	GLU217
A	PHE218
A	LYS274
A	GLN276

---

site_id	AC3
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT A 2

Chain	Residue
A	GLY43
A	ILE44
A	GLU45
A	TYR56
A	HOH669
A	HOH792
A	HOH797

---

site_id	AC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT A 3

Chain	Residue
A	ALA192
A	ALA193
A	SER243
A	GLY245
A	HOH1141

---

site_id	AC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE SO4 A 509

Chain	Residue
A	GLY286
A	ILE287
A	ARG347
A	PRO407
A	GLU408
A	HOH807

---

site_id	AC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE Y1 A 515

Chain	Residue
A	GLU52
A	ASP444
A	HOH669
A	HOH792
A	HOH793
A	HOH794
A	HOH797

---

site_id	AC7
Number of Residues	3
Details	BINDING SITE FOR RESIDUE Y1 A 516

Chain	Residue
A	PRO99
A	HOH725
A	HOH800

---

site_id	AC8
Number of Residues	1
Details	BINDING SITE FOR RESIDUE Y1 A 517

Chain	Residue
A	GLU408

---

site_id	AC9
Number of Residues	25
Details	BINDING SITE FOR RESIDUE HEM A 510

Chain	Residue
A	TYR96
A	ASN97
A	PRO99
A	ASP108
A	ASN109
A	THR112
A	ARG114
A	THR115
A	LEU126
A	CYS130
A	CYS133
A	LYS134
A	CYS214
A	HIS215
A	PHE218
A	HIS277
A	ALA398
A	HIS400
A	HOH548
A	HOH551
A	HOH569
A	HOH571
A	HOH575
A	HOH581
A	HOH618

---

site_id	BC1
Number of Residues	18
Details	BINDING SITE FOR RESIDUE HEM A 511

Chain	Residue
A	TYR57
A	GLN60
A	PHE61
A	TRP64
A	GLY167
A	CYS168
A	CYS171
A	HIS172
A	LEU179
A	HIS203
A	ARG207
A	MET300
A	TYR302
A	TYR310
A	SER311
A	HIS313
A	HOH827
A	HOH839

---

site_id	BC2
Number of Residues	20
Details	BINDING SITE FOR RESIDUE HEM A 512

Chain	Residue
A	GLY316
A	HOH546
A	HOH547
A	HOH725
A	SER70
A	PRO99
A	ARG100
A	GLY101
A	HIS102
A	TYR104
A	ALA105
A	ASP108
A	CYS133
A	LYS134
A	ILE166
A	CYS211
A	CYS214
A	HIS215
A	HIS299
A	MET300

---

site_id	BC3
Number of Residues	19
Details	BINDING SITE FOR RESIDUE HEM A 513

Chain	Residue
A	PRO99
A	HIS215
A	TRP280
A	TYR283
A	HIS288
A	SER294
A	CYS295
A	CYS298
A	HIS299
A	ASN317
A	PRO318
A	HIS400
A	GLY401
A	PHE403
A	PHE404
A	HIS405
A	HOH1000
A	HOH1078
A	HOH1087

---

site_id	BC4
Number of Residues	12
Details	BINDING SITE FOR RESIDUE HEM A 514

Chain	Residue
A	ILE287
A	HIS288
A	PRO318
A	SER325
A	CYS326
A	CYS329
A	HIS330
A	LYS344
A	PHE404
A	GLU408
A	HOH727
A	HOH915

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	9
Details	Binding site: {"description":"axial binding residue","evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	10
Details	Binding site: {"description":"covalent","evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	3
Details	Binding site: {"evidences":[{"source":"PDB","id":"1FS7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS8","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FS9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E80","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2E81","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNG","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3BNJ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000305"},{"source":"PDB","id":"3BNF","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---