3BDL
Crystal structure of a truncated human Tudor-SN
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | BINDING SITE FOR RESIDUE CIT A 2000 |
| Chain | Residue |
| A | GLU354 |
| A | HOH2022 |
| A | HOH2027 |
| A | HOH2076 |
| A | HOH2119 |
| A | HOH2146 |
| A | HOH2174 |
| A | HOH2324 |
| A | GLY355 |
| A | THR404 |
| A | PHE510 |
| A | SER511 |
| A | ARG514 |
| A | ARG537 |
| A | GLY538 |
| A | ARG540 |
| site_id | AC2 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE CIT A 2001 |
| Chain | Residue |
| A | ILE348 |
| A | ARG349 |
| A | ARG352 |
| A | TYR396 |
| A | ARG398 |
| A | SER401 |
| A | PRO402 |
| A | CYS415 |
| A | HOH2005 |
| A | HOH2028 |
| A | HOH2074 |
| A | HOH2095 |
| A | HOH2161 |
| A | HOH2451 |
| site_id | AC3 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE CIT A 2002 |
| Chain | Residue |
| A | ASN391 |
| A | THR393 |
| A | THR419 |
| A | HIS450 |
| A | LYS684 |
| A | ASN688 |
| A | HOH2100 |
| A | HOH2339 |
| A | HOH2354 |
| A | HOH2409 |
| A | HOH2454 |
| site_id | AC4 |
| Number of Residues | 11 |
| Details | BINDING SITE FOR RESIDUE CIT A 2003 |
| Chain | Residue |
| A | ARG441 |
| A | GLN442 |
| A | PHE552 |
| A | SER553 |
| A | GLU554 |
| A | GLU555 |
| A | HOH2083 |
| A | HOH2112 |
| A | HOH2134 |
| A | HOH2425 |
| A | HOH2604 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 155 |
| Details | Domain: {"description":"TNase-like 3","evidences":[{"source":"PROSITE-ProRule","id":"PRU00272","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 58 |
| Details | Domain: {"description":"Tudor","evidences":[{"source":"PROSITE-ProRule","id":"PRU00211","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 4 |
| Details | Motif: {"description":"Nuclear localization signal","evidences":[{"evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"19608861","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 2 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"20068231","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"},{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
