3B9T
Crystal structure of predicted acetamidase/formamidase (YP_546212.1) from Methylobacillus flagellatus KT at 1.58 A resolution
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0016811 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides |
| D | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 484 |
| Chain | Residue |
| A | ASP341 |
| A | HIS343 |
| A | GLU357 |
| A | MG485 |
| A | EDO494 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG A 485 |
| Chain | Residue |
| A | EDO494 |
| A | ASN314 |
| A | ASP316 |
| A | ASP341 |
| A | MG484 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CL A 486 |
| Chain | Residue |
| A | SER67 |
| D | HOH656 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG B 484 |
| Chain | Residue |
| B | ASP341 |
| B | HIS343 |
| B | GLU357 |
| B | MG485 |
| B | EDO486 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG B 485 |
| Chain | Residue |
| B | ASN314 |
| B | ASP316 |
| B | ASP341 |
| B | MG484 |
| B | EDO486 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG C 484 |
| Chain | Residue |
| C | ASP341 |
| C | HIS343 |
| C | GLU357 |
| C | MG485 |
| C | EDO496 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE MG C 485 |
| Chain | Residue |
| C | HIS160 |
| C | ASN314 |
| C | ASP316 |
| C | ASP341 |
| C | MG484 |
| C | EDO496 |
| site_id | AC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG D 484 |
| Chain | Residue |
| D | ASP341 |
| D | HIS343 |
| D | GLU357 |
| D | MG485 |
| D | EDO488 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE MG D 485 |
| Chain | Residue |
| D | ASN314 |
| D | ASP316 |
| D | ASP341 |
| D | MG484 |
| D | EDO488 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CL D 486 |
| Chain | Residue |
| B | ASN236 |
| D | ASP391 |
| D | GLY476 |
| site_id | BC2 |
| Number of Residues | 10 |
| Details | BINDING SITE FOR RESIDUE EDO A 487 |
| Chain | Residue |
| A | GLY174 |
| A | ASP175 |
| A | PRO329 |
| A | VAL330 |
| A | LEU374 |
| A | LEU382 |
| A | GLN383 |
| A | HOH608 |
| A | HOH638 |
| A | HOH645 |
| site_id | BC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO A 488 |
| Chain | Residue |
| A | TRP393 |
| A | GLN440 |
| A | LYS475 |
| A | PHE478 |
| A | HOH604 |
| C | GLU234 |
| C | ARG235 |
| site_id | BC4 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO A 489 |
| Chain | Residue |
| A | ASP183 |
| A | THR361 |
| A | THR363 |
| A | HOH541 |
| A | HOH589 |
| A | HOH685 |
| site_id | BC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO A 490 |
| Chain | Residue |
| A | HIS160 |
| A | TRP207 |
| A | VAL306 |
| A | ASN314 |
| A | GLY353 |
| A | ASP464 |
| A | EDO494 |
| A | HOH565 |
| site_id | BC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO A 491 |
| Chain | Residue |
| A | LYS80 |
| A | VAL82 |
| A | SER83 |
| A | LEU91 |
| A | GLY164 |
| site_id | BC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE EDO A 492 |
| Chain | Residue |
| A | GLU406 |
| A | ARG430 |
| A | HOH667 |
| site_id | BC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO A 493 |
| Chain | Residue |
| A | GLY323 |
| A | ALA324 |
| A | THR325 |
| A | GLU388 |
| A | THR389 |
| A | GLN390 |
| C | LYS322 |
| C | HOH554 |
| site_id | BC9 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE EDO A 494 |
| Chain | Residue |
| A | GLY353 |
| A | GLU357 |
| A | ASP464 |
| A | MG484 |
| A | MG485 |
| A | EDO490 |
| A | HOH565 |
| A | HIS110 |
| A | HIS160 |
| A | ASN314 |
| A | ASP316 |
| A | ASP341 |
| A | GLU350 |
| site_id | CC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO A 495 |
| Chain | Residue |
| A | ARG319 |
| A | ASP348 |
| A | ASP456 |
| A | PHE457 |
| A | GLY458 |
| A | HIS470 |
| A | HOH733 |
| A | HOH735 |
| site_id | CC2 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO A 496 |
| Chain | Residue |
| A | ASP115 |
| A | SER117 |
| A | PHE241 |
| A | TYR242 |
| A | LYS274 |
| A | TYR276 |
| A | HOH740 |
| site_id | CC3 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE EDO B 486 |
| Chain | Residue |
| B | HIS110 |
| B | HIS160 |
| B | ASN314 |
| B | ASP316 |
| B | ASP341 |
| B | GLU350 |
| B | GLY353 |
| B | GLU357 |
| B | ASP464 |
| B | MG484 |
| B | MG485 |
| B | EDO490 |
| site_id | CC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO B 487 |
| Chain | Residue |
| B | GLY174 |
| B | ASP175 |
| B | LEU382 |
| B | GLN383 |
| B | HOH621 |
| B | HOH664 |
| B | HOH741 |
| site_id | CC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 488 |
| Chain | Residue |
| B | ASP183 |
| B | THR361 |
| B | THR363 |
| B | HOH551 |
| B | HOH628 |
| B | HOH758 |
| site_id | CC6 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO B 489 |
| Chain | Residue |
| B | ALA300 |
| B | ASP301 |
| B | LEU302 |
| B | HOH582 |
| B | HOH738 |
| C | GLY254 |
| C | HOH711 |
| site_id | CC7 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO B 490 |
| Chain | Residue |
| B | HIS160 |
| B | TRP207 |
| B | ASN314 |
| B | ASP464 |
| B | EDO486 |
| B | HOH558 |
| site_id | CC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 491 |
| Chain | Residue |
| B | TYR131 |
| B | TRP132 |
| B | ASP133 |
| B | HOH744 |
| site_id | CC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO B 492 |
| Chain | Residue |
| B | LYS80 |
| B | VAL82 |
| B | SER83 |
| B | GLY164 |
| site_id | DC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO B 493 |
| Chain | Residue |
| B | ASP115 |
| B | SER117 |
| B | PHE241 |
| B | LYS274 |
| B | TYR276 |
| B | HOH810 |
| B | HOH863 |
| site_id | DC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO C 486 |
| Chain | Residue |
| C | GLY174 |
| C | ASP175 |
| C | PRO329 |
| C | VAL330 |
| C | LEU382 |
| C | HOH555 |
| C | HOH623 |
| C | HOH636 |
| site_id | DC3 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO C 487 |
| Chain | Residue |
| A | GLU234 |
| A | ARG235 |
| C | TRP393 |
| C | GLN440 |
| C | LYS475 |
| C | PHE478 |
| C | HOH708 |
| C | HOH901 |
| site_id | DC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 488 |
| Chain | Residue |
| C | THR361 |
| C | THR363 |
| C | HOH622 |
| C | HOH667 |
| C | HOH759 |
| site_id | DC5 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 489 |
| Chain | Residue |
| C | HIS160 |
| C | TRP207 |
| C | ASN314 |
| C | ASP464 |
| C | EDO491 |
| C | EDO496 |
| C | HOH536 |
| site_id | DC6 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 490 |
| Chain | Residue |
| C | TYR131 |
| C | TRP132 |
| C | ASP133 |
| C | HOH635 |
| C | HOH643 |
| site_id | DC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 491 |
| Chain | Residue |
| C | GLY156 |
| C | TRP207 |
| C | EDO489 |
| C | HOH614 |
| C | HOH654 |
| site_id | DC8 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 492 |
| Chain | Residue |
| C | GLU213 |
| C | ILE215 |
| C | HOH740 |
| D | ARG430 |
| D | ARG433 |
| site_id | DC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO C 493 |
| Chain | Residue |
| A | LYS322 |
| C | GLY323 |
| C | ALA324 |
| C | THR325 |
| C | GLU388 |
| site_id | EC1 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 494 |
| Chain | Residue |
| C | LYS169 |
| C | GLY170 |
| C | LEU368 |
| C | LYS370 |
| C | HOH594 |
| C | HOH899 |
| C | HOH908 |
| site_id | EC2 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO C 495 |
| Chain | Residue |
| C | LYS80 |
| C | VAL82 |
| C | SER83 |
| C | LYS92 |
| C | VAL94 |
| C | GLY164 |
| C | PRO165 |
| C | HOH757 |
| site_id | EC3 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE EDO C 496 |
| Chain | Residue |
| C | HIS110 |
| C | HIS160 |
| C | ASN314 |
| C | ASP316 |
| C | ASP341 |
| C | GLU350 |
| C | GLU357 |
| C | ASP464 |
| C | MG484 |
| C | MG485 |
| C | EDO489 |
| C | HOH536 |
| site_id | EC4 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO C 497 |
| Chain | Residue |
| C | ARG319 |
| C | ASP348 |
| C | ASP456 |
| C | GLY458 |
| C | HIS470 |
| C | VAL472 |
| C | HOH684 |
| site_id | EC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO C 498 |
| Chain | Residue |
| C | TYR327 |
| C | PRO378 |
| C | LEU379 |
| C | HOH701 |
| site_id | EC6 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EDO D 487 |
| Chain | Residue |
| B | TRP393 |
| B | GLN440 |
| B | LYS475 |
| B | PHE478 |
| B | GLY480 |
| D | GLU234 |
| D | ARG235 |
| D | HOH609 |
| D | HOH838 |
| site_id | EC7 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE EDO D 488 |
| Chain | Residue |
| D | HIS110 |
| D | HIS160 |
| D | ASN314 |
| D | ASP316 |
| D | ASP341 |
| D | GLU350 |
| D | GLY353 |
| D | GLU357 |
| D | ASP464 |
| D | MG484 |
| D | MG485 |
| D | EDO493 |
| site_id | EC8 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EDO D 489 |
| Chain | Residue |
| D | GLY174 |
| D | ASP175 |
| D | PRO329 |
| D | VAL330 |
| D | LEU382 |
| D | GLN383 |
| D | HOH557 |
| D | HOH625 |
| D | HOH650 |
| site_id | EC9 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO D 490 |
| Chain | Residue |
| B | GLU234 |
| B | ARG235 |
| D | TRP393 |
| D | GLN440 |
| D | LYS475 |
| D | PHE478 |
| D | HOH732 |
| D | HOH842 |
| site_id | FC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EDO D 491 |
| Chain | Residue |
| D | ASP183 |
| D | THR361 |
| D | THR363 |
| D | HOH595 |
| D | HOH704 |
| D | HOH740 |
| site_id | FC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE EDO D 492 |
| Chain | Residue |
| D | TYR131 |
| D | TRP132 |
| D | HOH602 |
| D | HOH642 |
| site_id | FC3 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EDO D 493 |
| Chain | Residue |
| D | HIS160 |
| D | TRP207 |
| D | VAL306 |
| D | ASN314 |
| D | ASP464 |
| D | EDO488 |
| D | HOH548 |
| site_id | FC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D 494 |
| Chain | Residue |
| C | LYS92 |
| D | ASN138 |
| D | VAL139 |
| D | ASP140 |
| D | ARG141 |
| site_id | FC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE EDO D 495 |
| Chain | Residue |
| D | LYS80 |
| D | VAL82 |
| D | SER83 |
| D | GLY164 |
| D | HOH909 |
| site_id | FC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EDO D 496 |
| Chain | Residue |
| C | HOH684 |
| D | ARG319 |
| D | ASP348 |
| D | ASP456 |
| D | GLY458 |
| D | HIS470 |
| D | VAL472 |
| D | HOH689 |
