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3B3W

Crystal structure of the S228A mutant of the aminopeptidase from Vibrio proteolyticus in complex with leucine

Functional Information from GO Data
ChainGOidnamespacecontents
A0006508biological_processproteolysis
A0008235molecular_functionmetalloexopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 292
ChainResidue
AASP117
AGLU152
AHIS256
ALEU297

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 293
ChainResidue
AHIS97
AASP117
AASP179
ALEU297

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SCN A 294
ChainResidue
ASER199
ATHR202
AGLN203
APRO267
AHOH506
ATHR194

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 295
ChainResidue
ATYR218
ANA296
AHOH347
AHOH348
AHOH387
AHOH502

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NA A 296
ChainResidue
ATHR206
AASP210
ATYR218
ANA295
AHOH310
AHOH347
AHOH387
AHOH502

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE LEU A 297
ChainResidue
AHIS97
AASP117
AGLU151
AGLU152
AASP179
ATYR225
ACYS227
AHIS256
AZN292
AZN293
AHOH360

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"10413478","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11401547","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8087555","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8647077","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1AMP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1CP6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1FT7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1IGB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LOK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1RTQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1TXR","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1XRY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2ANP","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2DEA","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2IQ6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2NYQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B35","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B3C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B3S","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B3T","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B3V","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B3W","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3B7I","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3FH4","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3VH9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1amp
ChainResidueDetails
AGLU151

site_idMCSA1
Number of Residues6
DetailsM-CSA 167
ChainResidueDetails
AHIS97metal ligand
AASP117metal ligand
AGLU151hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AGLU152metal ligand
AASP179metal ligand
AHIS256metal ligand

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PDB entries from 2025-12-24

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