Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

3B1Q

Structure of Burkholderia thailandensis nucleoside kinase (BthNK) in complex with inosine

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0005829	cellular_component	cytosol
A	0016301	molecular_function	kinase activity
A	0016740	molecular_function	transferase activity
A	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups
B	0000166	molecular_function	nucleotide binding
B	0005829	cellular_component	cytosol
B	0016301	molecular_function	kinase activity
B	0016740	molecular_function	transferase activity
B	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups
C	0000166	molecular_function	nucleotide binding
C	0005829	cellular_component	cytosol
C	0016301	molecular_function	kinase activity
C	0016740	molecular_function	transferase activity
C	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups
D	0000166	molecular_function	nucleotide binding
D	0005829	cellular_component	cytosol
D	0016301	molecular_function	kinase activity
D	0016740	molecular_function	transferase activity
D	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups
E	0000166	molecular_function	nucleotide binding
E	0005829	cellular_component	cytosol
E	0016301	molecular_function	kinase activity
E	0016740	molecular_function	transferase activity
E	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups
F	0000166	molecular_function	nucleotide binding
F	0005829	cellular_component	cytosol
F	0016301	molecular_function	kinase activity
F	0016740	molecular_function	transferase activity
F	0016772	molecular_function	transferase activity, transferring phosphorus-containing groups

Functional Information from PDB Data

site_id	AC1
Number of Residues	16
Details	BINDING SITE FOR RESIDUE NOS A 401

Chain	Residue
A	SER8
A	PRO143
A	GLN169
A	ASP253
A	HOH368
A	HOH382
A	HOH385
F	SER36
A	ALA10
A	ASP12
A	GLY47
A	GLY48
A	CYS49
A	ASN52
A	PHE117
A	MET122

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT A 327

Chain	Residue
A	HIS286
A	GLN287
A	THR291
A	ACT328
A	HOH586
E	HOH375
E	HOH383

site_id	AC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE ACT A 328

Chain	Residue
A	ARG43
A	GLU45
A	GLN287
A	ACT327
A	HOH418
A	HOH429
E	ALA84
E	LEU85
E	HOH504

site_id	AC4
Number of Residues	8
Details	BINDING SITE FOR RESIDUE ACT A 329

Chain	Residue
A	GLN113
A	PRO248
A	GLY250
A	CYS251
A	GLY252
A	HOH368
A	HOH405
F	ASN34

site_id	AC5
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ACT A 330

Chain	Residue
A	ARG296
A	ALA297
E	ARG244

site_id	AC6
Number of Residues	12
Details	BINDING SITE FOR RESIDUE P33 A 331

Chain	Residue
A	VAL240
A	ARG241
A	GLU243
A	ALA301
A	ARG302
A	HOH356
A	HOH500
E	ARG241
E	GLU243
E	ARG302
E	HOH344
E	HOH736

site_id	AC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA A 332

Chain	Residue
A	ILE183
A	GLU184
A	ALA186
A	ARG213
A	VAL214
A	HOH420

site_id	AC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA A 333

Chain	Residue
A	HOH421
A	HOH422
A	HOH784
A	HOH785
A	HOH786
F	HOH988

site_id	AC9
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA A 334

Chain	Residue
A	GLY204
A	HOH362
A	HOH787
A	HOH788
A	HOH984
C	ARG231

site_id	BC1
Number of Residues	16
Details	BINDING SITE FOR RESIDUE NOS B 401

Chain	Residue
B	SER8
B	ALA10
B	ASP12
B	GLY47
B	GLY48
B	CYS49
B	ASN52
B	PHE117
B	MET122
B	PRO143
B	GLN169
B	ASP253
B	HOH341
B	HOH360
B	HOH456
D	SER36

site_id	BC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT B 327

Chain	Residue
B	HIS286
B	GLN287
B	THR291
B	HOH589
F	HOH380

site_id	BC3
Number of Residues	8
Details	BINDING SITE FOR RESIDUE P33 B 328

Chain	Residue
B	HOH672
F	ARG44
F	PHE46
B	ARG44
B	GLU45
B	PHE46
B	ASP74
B	GLN102

site_id	BC4
Number of Residues	10
Details	BINDING SITE FOR RESIDUE P33 B 329

Chain	Residue
B	ARG241
B	ALA242
B	GLU243
B	ARG302
B	HOH371
B	HOH497
F	GLU243
F	ARG302
F	ACT327
F	HOH614

site_id	BC5
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA B 330

Chain	Residue
B	ILE183
B	GLU184
B	ALA186
B	ARG213
B	HOH601

site_id	BC6
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA B 331

Chain	Residue
B	GLY204
B	HOH596
B	HOH597
B	HOH598
B	HOH599
B	HOH600

site_id	BC7
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA B 332

Chain	Residue
B	ARG231
B	HOH378
B	HOH607
B	HOH608
B	HOH782
C	GLY204

site_id	BC8
Number of Residues	17
Details	BINDING SITE FOR RESIDUE NOS C 401

Chain	Residue
C	SER8
C	ALA10
C	ASP12
C	GLY47
C	GLY48
C	CYS49
C	ASN52
C	PHE117
C	MET122
C	PRO143
C	GLN169
C	ASP253
C	HOH350
C	HOH357
C	HOH364
C	HOH633
E	SER36

site_id	BC9
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT C 327

Chain	Residue
C	GLN113
C	PRO248
C	GLY250
C	CYS251
C	GLY252
C	HOH357
C	HOH635

site_id	CC1
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT C 328

Chain	Residue
C	ARG43
C	GLU45
C	GLN287
C	ACT329
C	HOH623
D	ALA84
D	LEU85

site_id	CC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT C 329

Chain	Residue
C	HIS286
C	GLN287
C	THR291
C	ACT328
C	HOH423
C	HOH549
D	HOH941

site_id	CC3
Number of Residues	10
Details	BINDING SITE FOR RESIDUE P33 C 330

Chain	Residue
C	VAL240
C	ARG241
C	GLU243
C	LEU278
C	ALA301
C	ARG302
C	HOH340
C	HOH690
D	ARG302
D	HOH357

site_id	CC4
Number of Residues	7
Details	BINDING SITE FOR RESIDUE P33 C 331

Chain	Residue
C	TYR11
C	ARG44
C	HOH390
C	HOH827
D	TYR11
D	ARG44
D	PHE46

site_id	CC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA C 332

Chain	Residue
C	ILE183
C	GLU184
C	ALA186
C	ARG213
C	HOH519
C	HOH779

site_id	CC6
Number of Residues	7
Details	BINDING SITE FOR RESIDUE NA C 333

Chain	Residue
C	HOH454
C	HOH464
C	HOH631
C	HOH632
C	HOH633
C	HOH634
C	HOH1039

site_id	CC7
Number of Residues	16
Details	BINDING SITE FOR RESIDUE NOS D 401

Chain	Residue
B	SER36
B	HOH706
D	SER8
D	ALA10
D	ASP12
D	GLY47
D	GLY48
D	CYS49
D	ASN52
D	PHE117
D	PRO143
D	GLN169
D	ASP253
D	HOH348
D	HOH416
D	HOH705

site_id	CC8
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT D 327

Chain	Residue
B	ASN34
D	PRO248
D	THR249
D	GLY250
D	CYS251
D	GLY252
D	HOH416

site_id	CC9
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA D 328

Chain	Residue
D	ILE183
D	GLU184
D	ALA186
D	ARG213
D	HOH486

site_id	DC1
Number of Residues	17
Details	BINDING SITE FOR RESIDUE NOS E 401

Chain	Residue
C	SER36
C	HOH448
E	SER8
E	ALA10
E	ASP12
E	GLY47
E	GLY48
E	CYS49
E	ASN52
E	PHE117
E	PRO143
E	GLN169
E	ASP253
E	HOH347
E	HOH350
E	HOH394
E	HOH1033

site_id	DC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ACT E 327

Chain	Residue
A	HOH370
E	HIS286
E	GLN287
E	THR291
E	ACT328
E	HOH412
E	HOH424

site_id	DC3
Number of Residues	9
Details	BINDING SITE FOR RESIDUE ACT E 328

Chain	Residue
A	ALA84
A	LEU85
A	HOH411
E	ARG43
E	GLU45
E	GLN287
E	ACT327
E	HOH370
E	HOH396

site_id	DC4
Number of Residues	1
Details	BINDING SITE FOR RESIDUE ACT E 329

Chain	Residue
E	PHE267

site_id	DC5
Number of Residues	9
Details	BINDING SITE FOR RESIDUE ACT E 330

Chain	Residue
C	ASN34
E	GLN113
E	PRO248
E	THR249
E	GLY250
E	CYS251
E	GLY252
E	HOH394
E	HOH417

site_id	DC6
Number of Residues	3
Details	BINDING SITE FOR RESIDUE ACT E 331

Chain	Residue
E	THR16
E	ARG43
E	HOH471

site_id	DC7
Number of Residues	12
Details	BINDING SITE FOR RESIDUE P33 E 332

Chain	Residue
A	TYR11
A	ARG44
A	GLU45
A	GLN102
C	HOH404
E	TYR11
E	ARG44
E	PHE46
E	HOH612
E	HOH613
E	HOH615
E	HOH616

site_id	DC8
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA E 333

Chain	Residue
E	ILE183
E	GLU184
E	ALA186
E	ARG213
E	VAL214
E	HOH416

site_id	DC9
Number of Residues	7
Details	BINDING SITE FOR RESIDUE NA E 334

Chain	Residue
E	ILE246
E	HOH388
E	HOH414
E	HOH418
E	HOH471
E	HOH603
E	HOH604

site_id	EC1
Number of Residues	6
Details	BINDING SITE FOR RESIDUE NA E 335

Chain	Residue
E	GLY204
E	HOH730
E	HOH731
E	HOH732
E	HOH959
E	HOH1058

site_id	EC2
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA E 336

Chain	Residue
E	GLU195
E	HOH733
E	HOH1032
E	HOH1033
E	HOH1034

site_id	EC3
Number of Residues	16
Details	BINDING SITE FOR RESIDUE NOS F 401

Chain	Residue
A	SER36
A	HOH748
F	SER8
F	ALA10
F	ASP12
F	GLY48
F	CYS49
F	ASN52
F	PHE117
F	MET122
F	PRO143
F	GLN169
F	ASP253
F	HOH370
F	HOH743
F	HOH745

site_id	EC4
Number of Residues	5
Details	BINDING SITE FOR RESIDUE ACT F 327

Chain	Residue
B	P33329
F	ARG302
F	ALA306
F	HOH338
F	HOH568

site_id	EC5
Number of Residues	6
Details	BINDING SITE FOR RESIDUE ACT F 328

Chain	Residue
A	ASN34
F	PRO248
F	GLY250
F	CYS251
F	GLY252
F	HOH745

site_id	EC6
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA F 329

Chain	Residue
F	ILE183
F	GLU184
F	ALA186
F	ARG213
F	HOH780

site_id	EC7
Number of Residues	5
Details	BINDING SITE FOR RESIDUE NA F 330

Chain	Residue
F	GLU195
F	HOH972
F	HOH1037
F	HOH1038
F	HOH1062

Functional Information from PROSITE/UniProt

site_id	PS00583
Number of Residues	25
Details	PFKB_KINASES_1 pfkB family of carbohydrate kinases signature 1. GGcAgNIAyaLnLLGgdarmmgtlG

Chain	Residue	Details
A	GLY47-GLY71

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)