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3AVK

Crystal structures of novel allosteric peptide inhibitors of HIV integrase in the LEDGF binding site

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0015074biological_processDNA integration
B0003676molecular_functionnucleic acid binding
B0015074biological_processDNA integration
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 2
ChainResidue
ATHR66
AHIS67
ALYS111
ALYS136
ALYS159
AHOH220
AHOH236

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 4
ChainResidue
AHIS171
ALEU172
AHOH222
AHOH235
ALYS71
AARG166

site_idAC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 A 5
ChainResidue
AHOH19
AGLY94
ASER123
ATHR124
ATHR125
AHOH218
AHOH248
DHOH126

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A 7
ChainResidue
AGLU85
AGLU87
APHE100
ALYS103
AARG107
AHOH243
BSO48
BLYS103
BARG107

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY A 1
ChainResidue
AALA105
AGLY106
ATRP108
BASN184
BHIS185
BGLY197

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 213
ChainResidue
AVAL72
AGLU92

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1
ChainResidue
BTHR66
BHIS67
BLYS111
BLYS136
BLYS159
BHOH228

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 3
ChainResidue
BLYS71
BARG166
BHIS171
BLEU172
BHOH234
BHOH236

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 6
ChainResidue
BHOH26
BGLY94
BSER123
BTHR124
BTHR125
BHOH217
BHOH251
FHOH127

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 8
ChainResidue
ASO47
AARG107
BGLU85
BALA86
BGLU87
BPHE100
BLYS103

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ACY B 2
ChainResidue
AASN184
AHIS185
AGLY197
BALA105
BGLY106
BTRP108

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 213
ChainResidue
BVAL72
BGLU92

site_idBC4
Number of Residues14
DetailsBINDING SITE FOR CHAIN D OF LEDGF PEPTIDE
ChainResidue
AGLN95
ATHR125
AALA128
ATRP131
AILE141
ATYR143
BASP167
BGLN168
BALA169
BGLU170
BHIS171
BTHR174
BMET178
DHOH126

site_idBC5
Number of Residues14
DetailsBINDING SITE FOR CHAIN F OF LEDGF PEPTIDE
ChainResidue
BTYR143
FHOH127
AASP167
AGLN168
AALA169
AGLU170
AHIS171
ATHR174
AHOH266
BGLN95
BTHR125
BALA128
BTRP131
BILE141

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AASP64
AASP116
BASP64
BASP116

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P04585
ChainResidueDetails
AGLU152
BGLU152

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PDB entries from 2024-10-16

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