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3ATO

Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation

Functional Information from GO Data
ChainGOidnamespacecontents
A0003796molecular_functionlysozyme activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005737cellular_componentcytoplasm
A0005783cellular_componentendoplasmic reticulum
A0016231molecular_functionbeta-N-acetylglucosaminidase activity
A0016798molecular_functionhydrolase activity, acting on glycosyl bonds
A0016998biological_processcell wall macromolecule catabolic process
A0031640biological_processkilling of cells of another organism
A0042742biological_processdefense response to bacterium
A0042802molecular_functionidentical protein binding
A0050829biological_processdefense response to Gram-negative bacterium
A0050830biological_processdefense response to Gram-positive bacterium
A0051672biological_processobsolete catabolism by organism of cell wall peptidoglycan in other organism
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GEE A 201
ChainResidue
AARG5
AALA122
ATRP123
AHOH366

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GEE A 202
ChainResidue
ATRP63
AILE98
AALA107
ATRP108
AHOH332
AHOH391
AGLU35
AASP52
AGLN57
AILE58
AASN59

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GEE A 203
ChainResidue
AASN19
AARG21
AGLY22
AASN44
AARG45
AASN46

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 204
ChainResidue
ATYR23
AALA110
AASN113

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 205
ChainResidue
ASER24
AGLY26
AGLN121

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 206
ChainResidue
ASER85
AASP87
AILE88
AHOH384
AHOH385

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 207
ChainResidue
AGLY22
ASER24
AASN27
AARG114

site_idAC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 208
ChainResidue
AASN44
AARG68

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 209
ChainResidue
AGLN41
AALA42
ATHR43
ATYR53
AARG68

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CL A 210
ChainResidue
AARG45
AGLY49
ASER50
ATHR51
AASP66
AARG68
ATHR69

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 211
ChainResidue
AGLY67
AARG68
ATHR69

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 212
ChainResidue
AGLY71
AGLY71

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CL A 213
ChainResidue
ATYR53
AGLY54
AILE55
ALEU56
AGLN57
ASER91

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE NA A 214
ChainResidue
ASER60
ACYS64
ASER72
AARG73
AHOH304
AHOH346

Functional Information from PROSITE/UniProt
site_idPS00128
Number of Residues19
DetailsGLYCOSYL_HYDROL_F22_1 Glycosyl hydrolases family 22 (GH22) domain signature. CnipCsaLlssDItasvnC
ChainResidueDetails
ACYS76-CYS94

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE:
ChainResidueDetails
AGLU35
AASP52

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING:
ChainResidueDetails
AASP101

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 203
ChainResidueDetails
AGLU35hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AASN46
AASP48
ASER50
AASP52covalently attached, electrostatic stabiliser, nucleofuge, nucleophile, polar/non-polar interaction
AASN59

222415

PDB entries from 2024-07-10

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