3ANV
Crystal structure of D-serine dehydratase from chicken kidney (2,3-DAP complex)
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0008270 | molecular_function | zinc ion binding |
| A | 0008721 | molecular_function | D-serine ammonia-lyase activity |
| A | 0016829 | molecular_function | lyase activity |
| A | 0030170 | molecular_function | pyridoxal phosphate binding |
| A | 0030425 | cellular_component | dendrite |
| A | 0036088 | biological_process | D-serine catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0070178 | biological_process | D-serine metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 14 |
| Details | BINDING SITE FOR RESIDUE PLP A 401 |
| Chain | Residue |
| A | HIS43 |
| A | PRO240 |
| A | GLY241 |
| A | ASN242 |
| A | 2RA455 |
| A | HOH583 |
| A | LYS45 |
| A | ARG143 |
| A | TYR174 |
| A | HIS176 |
| A | TYR181 |
| A | SER221 |
| A | THR222 |
| A | HIS239 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CL A 450 |
| Chain | Residue |
| A | LEU290 |
| A | LEU290 |
| A | HOH502 |
| A | HOH502 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ZN A 451 |
| Chain | Residue |
| A | HIS347 |
| A | CYS349 |
| A | 2RA455 |
| A | HOH572 |
| A | HOH583 |
| A | HOH584 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE 2RA A 455 |
| Chain | Residue |
| A | LYS45 |
| A | HIS176 |
| A | THR317 |
| A | GLN318 |
| A | PLP401 |
| A | ZN451 |
| A | HOH581 |
| A | HOH584 |
| A | HOH585 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 5 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"21676877","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3ANU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ANV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3AWN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3AWO","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"21676877","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3ANU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3ANV","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-(pyridoxal phosphate)lysine","evidences":[{"source":"PubMed","id":"21676877","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3ANU","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"3AWN","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
