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3AI5

Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein

Functional Information from GO Data
ChainGOidnamespacecontents
A0003674molecular_functionmolecular_function
A0005575cellular_componentcellular_component
A0006091biological_processgeneration of precursor metabolites and energy
A0008218biological_processbioluminescence
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 315
ChainResidue
AGLU142
ATYR143
ASER202
AHOH378
AHOH607

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 316
ChainResidue
AHOH449
AHOH465
AGLU34
AASP36
ALYS41
ATHR43

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO A 317
ChainResidue
AARG96
ATHR97
AGLY116
AASP117
ATYR182
AEDO319
AHOH553

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 318
ChainResidue
AARG109
AGLU111
AARG122
AGLU124

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO A 319
ChainResidue
AGLU95
AARG96
ATHR108
AEDO317
AHOH506

Functional Information from PROSITE/UniProt
site_idPS00299
Number of Residues26
DetailsUBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
ChainResidueDetails
ALYS261-ARG286

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: (Z)-2,3-didehydrotyrosine => ECO:0000269|PubMed:8448132
ChainResidueDetails
AVAL68

site_idSWS_FT_FI2
Number of Residues2
DetailsCROSSLNK: 5-imidazolinone (Ser-Gly) => ECO:0000269|PubMed:8448132
ChainResidueDetails
ACR266
AGLN69

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Interacts with activating enzyme
ChainResidueDetails
AARG286
AARG304

site_idSWS_FT_FI4
Number of Residues1
DetailsSITE: Essential for function
ChainResidueDetails
AHIS300

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P62987
ChainResidueDetails
ASER297

site_idSWS_FT_FI6
Number of Residues8
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P62987
ChainResidueDetails
ALYS238
ALYS243
ALYS259
ALYS261
ALYS265
ALYS280
ALYS295

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PDB entries from 2024-06-26

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