3AEP
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 containing alpha-amino-alpha, beta-butenoic acid-pyridoxal-5'-phosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0016829 | molecular_function | lyase activity |
A | 0018826 | molecular_function | methionine gamma-lyase activity |
A | 0019346 | biological_process | transsulfuration |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0016829 | molecular_function | lyase activity |
B | 0018826 | molecular_function | methionine gamma-lyase activity |
B | 0019346 | biological_process | transsulfuration |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0016829 | molecular_function | lyase activity |
C | 0018826 | molecular_function | methionine gamma-lyase activity |
C | 0019346 | biological_process | transsulfuration |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
D | 0016829 | molecular_function | lyase activity |
D | 0018826 | molecular_function | methionine gamma-lyase activity |
D | 0019346 | biological_process | transsulfuration |
D | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE 4LM A 2001 |
Chain | Residue |
A | SER82 |
A | SER332 |
A | THR347 |
A | ARG367 |
A | MEE2002 |
D | TYR1553 |
D | ARG1555 |
A | GLY83 |
A | MET84 |
A | TYR108 |
A | ASN155 |
A | ASP180 |
A | SER202 |
A | SER204 |
A | LYS205 |
site_id | AC2 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE MEE A 2002 |
Chain | Residue |
A | TYR108 |
A | THR347 |
A | 4LM2001 |
site_id | AC3 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE 4LM B 2003 |
Chain | Residue |
B | SER582 |
B | GLY583 |
B | MET584 |
B | TYR608 |
B | GLU651 |
B | ASN655 |
B | ASP680 |
B | THR682 |
B | SER702 |
B | SER704 |
B | LYS705 |
B | ILE714 |
B | SER832 |
B | THR847 |
B | ARG867 |
C | TYR1053 |
C | ARG1055 |
site_id | AC4 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE 4LM C 2004 |
Chain | Residue |
B | TYR553 |
B | ARG555 |
C | SER1082 |
C | GLY1083 |
C | MET1084 |
C | TYR1108 |
C | ASN1155 |
C | ASP1180 |
C | THR1182 |
C | SER1202 |
C | SER1204 |
C | LYS1205 |
C | GLY1215 |
C | SER1332 |
C | LEU1333 |
C | THR1347 |
C | ARG1367 |
C | MEE2005 |
site_id | AC5 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MEE C 2005 |
Chain | Residue |
C | TYR1108 |
C | 4LM2004 |
site_id | AC6 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE 4LM D 2006 |
Chain | Residue |
A | TYR53 |
A | ARG55 |
D | SER1582 |
D | GLY1583 |
D | MET1584 |
D | TYR1608 |
D | ASN1655 |
D | ASP1680 |
D | THR1682 |
D | SER1702 |
D | SER1704 |
D | LYS1705 |
D | ILE1714 |
D | GLY1715 |
D | SER1832 |
D | THR1847 |
D | ARG1867 |
site_id | AC7 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 2007 |
Chain | Residue |
A | ARG176 |
A | HOH3655 |
site_id | AC8 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 B 2008 |
Chain | Residue |
B | ARG676 |
B | HOH3630 |
site_id | AC9 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 C 2009 |
Chain | Residue |
C | ARG1176 |
C | HOH3423 |
C | HOH3664 |
site_id | BC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 D 2010 |
Chain | Residue |
D | ARG1676 |
D | HOH3248 |
site_id | BC2 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL A 2011 |
Chain | Residue |
A | LYS312 |
A | HOH3124 |
site_id | BC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE GOL C 2012 |
Chain | Residue |
C | HOH3564 |
C | HOH3592 |