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3A7K

Crystal structure of halorhodopsin from Natronomonas pharaonis

Functional Information from GO Data
ChainGOidnamespacecontents
A0005216molecular_functionmonoatomic ion channel activity
A0006811biological_processmonoatomic ion transport
A0016020cellular_componentmembrane
B0005216molecular_functionmonoatomic ion channel activity
B0006811biological_processmonoatomic ion transport
B0016020cellular_componentmembrane
D0005216molecular_functionmonoatomic ion channel activity
D0006811biological_processmonoatomic ion transport
D0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE RET A 292
ChainResidue
ATRP127
ALYS256
ATHR131
AMET159
ATYR180
ASER183
APHE187
ATRP222
ATYR225
AASP252

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE 22B A 300
ChainResidue
ALEU29
AGLY46
ATHR56
ALYS65
AILE72
DTHR151
DPHE155
DALA185
DGLU197

site_idAC3
Number of Residues9
DetailsBINDING SITE FOR RESIDUE L1P A 293
ChainResidue
ALEU89
AHOH552
DSER92
DLEU94
DTRP121
DLEU125
DVAL161
DLEU164
DLEU168

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE L2P A 294
ChainResidue
AALA146
APHE150
AILE153
ATHR154
AILE157
AALA158
AL2P295
BVAL77
BALA80
BL2P295

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE L2P A 295
ChainResidue
AMET133
ALEU136
AILE157
AL2P294
DL2P294

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE L3P A 331
ChainResidue
ALEU195
AGLN200

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE L3P A 296
ChainResidue
AILE188
ATYR192

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE L3P A 297
ChainResidue
ASER172
ALEU174
APHE178
BPHE25
BASN270

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE L3P A 298
ChainResidue
ALEU29
DLEU174

site_idBC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE L3P A 299
ChainResidue
BL2P295

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE L3P A 301
ChainResidue
ATRP177
ATYR180
ACYS184

site_idBC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE L3P A 333
ChainResidue
ASER36
AVAL238
ALEU239
ATYR243
ATRP246
AALA250

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 401
ChainResidue
ATHR126
ASER130
ALYS256

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 402
ChainResidue
AASN145
BPRO62
BHOH527
BHOH531

site_idBC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE 22B B 300
ChainResidue
ATHR147
ATHR151
APHE155
AALA185
AVAL189
BALA43
BGLY46
BILE49
BVAL53
BTHR56
BILE72
BVAL273
BHOH531

site_idBC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE L3P B 331
ChainResidue
BTYR180
DPHE54

site_idBC8
Number of Residues11
DetailsBINDING SITE FOR RESIDUE RET B 292
ChainResidue
BTRP127
BTHR131
BMET159
BTYR180
BSER183
BPHE187
BTRP222
BTYR225
BPRO226
BASP252
BLYS256

site_idBC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 401
ChainResidue
BLYS256
BHOH502
BTHR126
BSER130

site_idCC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE L1P B 293
ChainResidue
AVAL19
ASER92
AVAL93
ALEU125
AVAL161
AALA165
BVAL19
BALA80
BLEU89
BTHR90
BLEU125

site_idCC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 402
ChainResidue
BASN145

site_idCC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE L1P B 294
ChainResidue
BSER92
BLEU94
BTRP121
BLEU125
BILE157
BVAL161
BALA165
BHOH541
DALA80
DLEU89
DLEU125
DTHR126

site_idCC4
Number of Residues15
DetailsBINDING SITE FOR RESIDUE 22B D 300
ChainResidue
BPHE101
BTHR147
BLYS148
BTHR151
BPHE155
BILE182
BILE193
BGLU197
DILE49
DTHR56
DLYS65
DVAL69
DILE72
DVAL76
DILE79

site_idCC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE L2P B 295
ChainResidue
AALA146
APHE150
AL2P294
AL3P299
BALA128
BLEU129
BMET133
BLEU136
BILE153
BILE157
BL2P296

site_idCC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE L2P B 296
ChainResidue
BALA146
BPHE150
BILE153
BTHR154
BILE157
BALA158
BVAL161
BL2P295

site_idCC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE L3P D 330
ChainResidue
DLEU174

site_idCC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE RET D 292
ChainResidue
DTRP127
DTHR131
DMET159
DGLY163
DTYR180
DSER183
DTRP222
DTYR225
DPRO226
DTRP229
DASP252
DLYS256

site_idCC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL D 401
ChainResidue
DTHR126
DTRP127
DSER130
DLYS256
DHOH502

site_idDC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL D 402
ChainResidue
APRO62
ALYS65
DASN145
DLYS148

site_idDC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE L2P D 293
ChainResidue
BPHE150
DLEU66
DALA128
DMET133
DLEU136
DILE157

site_idDC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE L2P D 294
ChainResidue
AL2P295
DSER144
DALA146
DLEU149
DILE153
DTHR154
DILE157

Functional Information from PROSITE/UniProt
site_idPS00950
Number of Residues13
DetailsBACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYlTWaLSTPMIL
ChainResidueDetails
AARG123-LEU135

243911

PDB entries from 2025-10-29

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