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3A5F

High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate

Functional Information from GO Data
ChainGOidnamespacecontents
A0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
A0009089biological_processlysine biosynthetic process via diaminopimelate
A0016829molecular_functionlyase activity
B0008840molecular_function4-hydroxy-tetrahydrodipicolinate synthase activity
B0009089biological_processlysine biosynthetic process via diaminopimelate
B0016829molecular_functionlyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 293
ChainResidue
AASN258
AASP266
ALEU267
AHOH329
AHOH366
AHOH911

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 1
ChainResidue
BHOH341
BHOH353
BHOH747
BASN258
BASP266
BLEU267

Functional Information from PROSITE/UniProt
site_idPS00583
Number of Residues25
DetailsPFKB_KINASES_1 pfkB family of carbohydrate kinases signature 1. AGtGsNNTaaSiAMSkwaesigvdG
ChainResidueDetails
AALA76-GLY100

site_idPS00665
Number of Residues18
DetailsDHDPS_1 Dihydrodipicolinate synthase signature 1. AIIvcGTTGEAttmtetE
ChainResidueDetails
AALA39-GLU56

site_idPS00666
Number of Residues31
DetailsDHDPS_2 Dihydrodipicolinate synthase signature 2. YNVPgrTglnItpgtlkelcedkn.IvAVKEA
ChainResidueDetails
ATYR134-ALA164

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PDB entries from 2025-06-18

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