Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0006400 | biological_process | tRNA modification |
A | 0008033 | biological_process | tRNA processing |
A | 0008168 | molecular_function | methyltransferase activity |
A | 0008175 | molecular_function | tRNA methyltransferase activity |
A | 0030488 | biological_process | tRNA methylation |
A | 0031591 | biological_process | wybutosine biosynthetic process |
A | 0032259 | biological_process | methylation |
B | 0005737 | cellular_component | cytoplasm |
B | 0005739 | cellular_component | mitochondrion |
B | 0006400 | biological_process | tRNA modification |
B | 0008033 | biological_process | tRNA processing |
B | 0008168 | molecular_function | methyltransferase activity |
B | 0008175 | molecular_function | tRNA methyltransferase activity |
B | 0030488 | biological_process | tRNA methylation |
B | 0031591 | biological_process | wybutosine biosynthetic process |
B | 0032259 | biological_process | methylation |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | BINDING SITE FOR RESIDUE SAH A 801 |
Chain | Residue |
A | ILE27 |
A | GLY117 |
A | ASP146 |
A | TYR147 |
A | LEU150 |
A | CYS195 |
A | ASP196 |
A | LEU197 |
A | ASN198 |
A | GLU224 |
A | VAL225 |
A | GLN28 |
A | SER226 |
A | HOH837 |
A | HOH843 |
A | HOH1193 |
A | HOH1194 |
A | THR30 |
A | ASN31 |
A | SER34 |
A | LYS38 |
A | ARG88 |
A | GLY115 |
A | CYS116 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE CIT A 802 |
Chain | Residue |
A | LYS484 |
A | ILE524 |
A | PHE525 |
A | EDO696 |
A | HOH907 |
A | HOH1014 |
A | HOH1018 |
A | HOH1020 |
A | HOH1079 |
A | HOH1166 |
B | LYS326 |
site_id | AC3 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 696 |
Chain | Residue |
A | LEU486 |
A | SER487 |
A | HIS488 |
A | HOH718 |
A | CIT802 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO A 697 |
Chain | Residue |
A | GLY615 |
A | LEU655 |
A | HOH755 |
A | HOH933 |
A | HOH1227 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE EDO A 698 |
Chain | Residue |
A | VAL438 |
A | ASP469 |
A | HOH768 |
B | VAL438 |
B | ASP469 |
B | HOH717 |
site_id | AC6 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE SAH B 801 |
Chain | Residue |
B | SER34 |
B | ILE35 |
B | LYS38 |
B | ARG88 |
B | GLY115 |
B | CYS116 |
B | GLY117 |
B | ASP146 |
B | TYR147 |
B | CYS195 |
B | ASP196 |
B | LEU197 |
B | ASN198 |
B | GLU224 |
B | VAL225 |
B | SER226 |
B | HOH719 |
B | HOH888 |
B | HOH951 |
B | HOH1122 |
site_id | AC7 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE CIT B 802 |
Chain | Residue |
B | LYS484 |
B | ILE524 |
B | PHE525 |
B | EDO696 |
B | HOH763 |
B | HOH796 |
B | HOH814 |
B | HOH891 |
B | HOH974 |
B | HOH1159 |
B | HOH1309 |
site_id | AC8 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE EDO B 696 |
Chain | Residue |
B | LEU486 |
B | SER487 |
B | HIS488 |
B | HOH716 |
B | CIT802 |
site_id | AC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE EDO B 697 |
Chain | Residue |
B | PRO264 |
B | GLY615 |
B | MET654 |
B | LEU655 |
B | HOH726 |
B | HOH918 |
B | HOH1072 |
site_id | BC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE EDO B 698 |
Chain | Residue |
B | HOH794 |
B | HOH866 |
B | HOH876 |
B | HOH1419 |
B | ASP392 |
B | HIS443 |
B | HIS493 |
B | GLN601 |
B | HOH776 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | ACT_SITE: Proton donor; for both methylation and methoxycarbonylation activities => ECO:0000269|PubMed:19287006 |
Chain | Residue | Details |
A | ARG88 | |
B | ARG88 | |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | ACT_SITE: Proton acceptor; for methoxycarbonylation activity => ECO:0000305|PubMed:19287006 |
Chain | Residue | Details |
A | TYR229 | |
B | TYR229 | |
site_id | SWS_FT_FI3 |
Number of Residues | 12 |
Details | BINDING: |
Chain | Residue | Details |
A | LYS38 | |
B | ASP146 | |
B | ASP196 | |
B | GLU224 | |
A | ARG88 | |
A | GLY115 | |
A | ASP146 | |
A | ASP196 | |
A | GLU224 | |
B | LYS38 | |
B | ARG88 | |
B | GLY115 | |