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2ZDK

Exploring Trypsin S3 Pocket

Functional Information from GO Data
ChainGOidnamespacecontents
A0004175molecular_functionendopeptidase activity
A0004252molecular_functionserine-type endopeptidase activity
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0007586biological_processdigestion
A0008236molecular_functionserine-type peptidase activity
A0046872molecular_functionmetal ion binding
A0097180cellular_componentserine protease inhibitor complex
A0097655molecular_functionserpin family protein binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 601
ChainResidue
AGLU70
AASN72
AVAL75
AGLU80
AHOH1012
AHOH1016

site_idAC2
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 701
ChainResidue
AGOL904
AHOH1064
AHOH1078
AHOH1158
ALYS87
ALYS107
ATHR149

site_idAC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 50U A 501
ChainResidue
AHIS57
AASN97
ATHR98
ASER127
ACYS128
AASP189
ASER190
ACYS191
AGLN192
ASER195
AVAL213
ASER214
ATRP215
AGLY216
AGLY219
ACYS220
AGLY226
AHOH1023
AHOH1104
AHOH1210

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE DMS A 801
ChainResidue
AASN101
AASN179
ATYR234
AHOH1164
AHOH1208

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 901
ChainResidue
AHIS57
ACYS58
ATYR59
ALYS60
AGOL903
AHOH1075

site_idAC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 902
ChainResidue
AILE47
AASN48
ALEU123
APRO173
ALYS239
AHOH1130
AHOH1155
AHOH1170

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 903
ChainResidue
AALA56
ATYR59
ATYR94
AGOL901
AHOH1007

site_idAC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 904
ChainResidue
AGLN50
ALYS107
ALEU108
ALYS109
ATHR177
ASER178
ASO4701
AHOH1036
AHOH1078
AHOH1158

site_idAC9
Number of Residues10
DetailsBINDING SITE FOR RESIDUE GOL A 905
ChainResidue
AALA129
AALA132
AILE162
ALEU163
AASP165
APHE181
ALYS230
AHOH1020
AHOH1181
AHOH1202

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 906
ChainResidue
AGLU80
AGLN81
APHE82

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 907
ChainResidue
AGLY62
AILE63
AALA85
ASER86
ATYR151
AHOH1065

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
AVAL53-CYS58

site_idPS00135
Number of Residues12
DetailsTRYPSIN_SER Serine proteases, trypsin family, serine active site. DScqGDSGGPVV
ChainResidueDetails
AASP189-VAL200

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
ALYS60
ALEU105
APRO198

site_idSWS_FT_FI2
Number of Residues7
DetailsBINDING:
ChainResidueDetails
AILE73
AVAL75
AGLY78
AILE83
AGLN192
ASER195
APRO198

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AHIS57

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
AHIS57

site_idCSA3
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY193

site_idCSA4
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ASER195
AGLY196

site_idCSA5
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AGLY193
AHIS57

site_idCSA6
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ASER195
AHIS57
AGLY196

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PDB entries from 2024-07-17

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