2Z3B
Crystal Structure of Bacillus Subtilis CodW, a non-canonical HslV-like peptidase with an impaired catalytic apparatus
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004298 | molecular_function | threonine-type endopeptidase activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005839 | cellular_component | proteasome core complex |
| A | 0006508 | biological_process | proteolysis |
| A | 0008233 | molecular_function | peptidase activity |
| A | 0008236 | molecular_function | serine-type peptidase activity |
| A | 0009376 | cellular_component | HslUV protease complex |
| A | 0030163 | biological_process | protein catabolic process |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| B | 0004298 | molecular_function | threonine-type endopeptidase activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005839 | cellular_component | proteasome core complex |
| B | 0006508 | biological_process | proteolysis |
| B | 0008233 | molecular_function | peptidase activity |
| B | 0008236 | molecular_function | serine-type peptidase activity |
| B | 0009376 | cellular_component | HslUV protease complex |
| B | 0030163 | biological_process | protein catabolic process |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| C | 0004298 | molecular_function | threonine-type endopeptidase activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005839 | cellular_component | proteasome core complex |
| C | 0006508 | biological_process | proteolysis |
| C | 0008233 | molecular_function | peptidase activity |
| C | 0008236 | molecular_function | serine-type peptidase activity |
| C | 0009376 | cellular_component | HslUV protease complex |
| C | 0030163 | biological_process | protein catabolic process |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| D | 0004298 | molecular_function | threonine-type endopeptidase activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005839 | cellular_component | proteasome core complex |
| D | 0006508 | biological_process | proteolysis |
| D | 0008233 | molecular_function | peptidase activity |
| D | 0008236 | molecular_function | serine-type peptidase activity |
| D | 0009376 | cellular_component | HslUV protease complex |
| D | 0030163 | biological_process | protein catabolic process |
| D | 0046872 | molecular_function | metal ion binding |
| D | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| E | 0004298 | molecular_function | threonine-type endopeptidase activity |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0005839 | cellular_component | proteasome core complex |
| E | 0006508 | biological_process | proteolysis |
| E | 0008233 | molecular_function | peptidase activity |
| E | 0008236 | molecular_function | serine-type peptidase activity |
| E | 0009376 | cellular_component | HslUV protease complex |
| E | 0030163 | biological_process | protein catabolic process |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| F | 0004298 | molecular_function | threonine-type endopeptidase activity |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0005839 | cellular_component | proteasome core complex |
| F | 0006508 | biological_process | proteolysis |
| F | 0008233 | molecular_function | peptidase activity |
| F | 0008236 | molecular_function | serine-type peptidase activity |
| F | 0009376 | cellular_component | HslUV protease complex |
| F | 0030163 | biological_process | protein catabolic process |
| F | 0046872 | molecular_function | metal ion binding |
| F | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| G | 0004298 | molecular_function | threonine-type endopeptidase activity |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0005839 | cellular_component | proteasome core complex |
| G | 0006508 | biological_process | proteolysis |
| G | 0008233 | molecular_function | peptidase activity |
| G | 0008236 | molecular_function | serine-type peptidase activity |
| G | 0009376 | cellular_component | HslUV protease complex |
| G | 0030163 | biological_process | protein catabolic process |
| G | 0046872 | molecular_function | metal ion binding |
| G | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| H | 0004298 | molecular_function | threonine-type endopeptidase activity |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0005839 | cellular_component | proteasome core complex |
| H | 0006508 | biological_process | proteolysis |
| H | 0008233 | molecular_function | peptidase activity |
| H | 0008236 | molecular_function | serine-type peptidase activity |
| H | 0009376 | cellular_component | HslUV protease complex |
| H | 0030163 | biological_process | protein catabolic process |
| H | 0046872 | molecular_function | metal ion binding |
| H | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| I | 0004298 | molecular_function | threonine-type endopeptidase activity |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0005839 | cellular_component | proteasome core complex |
| I | 0006508 | biological_process | proteolysis |
| I | 0008233 | molecular_function | peptidase activity |
| I | 0008236 | molecular_function | serine-type peptidase activity |
| I | 0009376 | cellular_component | HslUV protease complex |
| I | 0030163 | biological_process | protein catabolic process |
| I | 0046872 | molecular_function | metal ion binding |
| I | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| J | 0004298 | molecular_function | threonine-type endopeptidase activity |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0005839 | cellular_component | proteasome core complex |
| J | 0006508 | biological_process | proteolysis |
| J | 0008233 | molecular_function | peptidase activity |
| J | 0008236 | molecular_function | serine-type peptidase activity |
| J | 0009376 | cellular_component | HslUV protease complex |
| J | 0030163 | biological_process | protein catabolic process |
| J | 0046872 | molecular_function | metal ion binding |
| J | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| K | 0004298 | molecular_function | threonine-type endopeptidase activity |
| K | 0005737 | cellular_component | cytoplasm |
| K | 0005839 | cellular_component | proteasome core complex |
| K | 0006508 | biological_process | proteolysis |
| K | 0008233 | molecular_function | peptidase activity |
| K | 0008236 | molecular_function | serine-type peptidase activity |
| K | 0009376 | cellular_component | HslUV protease complex |
| K | 0030163 | biological_process | protein catabolic process |
| K | 0046872 | molecular_function | metal ion binding |
| K | 0051603 | biological_process | proteolysis involved in protein catabolic process |
| L | 0004298 | molecular_function | threonine-type endopeptidase activity |
| L | 0005737 | cellular_component | cytoplasm |
| L | 0005839 | cellular_component | proteasome core complex |
| L | 0006508 | biological_process | proteolysis |
| L | 0008233 | molecular_function | peptidase activity |
| L | 0008236 | molecular_function | serine-type peptidase activity |
| L | 0009376 | cellular_component | HslUV protease complex |
| L | 0030163 | biological_process | protein catabolic process |
| L | 0046872 | molecular_function | metal ion binding |
| L | 0051603 | biological_process | proteolysis involved in protein catabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA A 1001 |
| Chain | Residue |
| A | GLY164 |
| A | CYS167 |
| A | THR170 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE NA B 1002 |
| Chain | Residue |
| B | GLY164 |
| B | CYS167 |
| B | THR170 |
| B | HOH1010 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE NA C 1003 |
| Chain | Residue |
| C | THR170 |
| C | HOH1024 |
| C | GLY164 |
| C | CYS167 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA D 1004 |
| Chain | Residue |
| D | GLY164 |
| D | CYS167 |
| D | THR170 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA E 1005 |
| Chain | Residue |
| E | GLY164 |
| E | CYS167 |
| E | THR170 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA F 1006 |
| Chain | Residue |
| F | GLY164 |
| F | CYS167 |
| F | THR170 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA G 1007 |
| Chain | Residue |
| G | GLY164 |
| G | CYS167 |
| G | THR170 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA J 1008 |
| Chain | Residue |
| J | GLY164 |
| J | CYS167 |
| J | THR170 |
| site_id | AC9 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA I 1009 |
| Chain | Residue |
| I | GLY164 |
| I | CYS167 |
| I | THR170 |
| site_id | BC1 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE NA H 1010 |
| Chain | Residue |
| H | GLY164 |
| H | CYS167 |
| site_id | BC2 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE NA K 1011 |
| Chain | Residue |
| K | GLY164 |
| K | CYS167 |
| site_id | BC3 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE NA L 1012 |
| Chain | Residue |
| L | GLY164 |
| L | CYS167 |
| L | THR170 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 12 |
| Details | ACT_SITE: |
| Chain | Residue | Details |
| A | SER1 | |
| J | SER1 | |
| K | SER1 | |
| L | SER1 | |
| B | SER1 | |
| C | SER1 | |
| D | SER1 | |
| E | SER1 | |
| F | SER1 | |
| G | SER1 | |
| H | SER1 | |
| I | SER1 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 36 |
| Details | BINDING: |
| Chain | Residue | Details |
| A | GLY164 | |
| D | GLY164 | |
| D | CYS167 | |
| D | THR170 | |
| E | GLY164 | |
| E | CYS167 | |
| E | THR170 | |
| F | GLY164 | |
| F | CYS167 | |
| F | THR170 | |
| G | GLY164 | |
| A | CYS167 | |
| G | CYS167 | |
| G | THR170 | |
| H | GLY164 | |
| H | CYS167 | |
| H | THR170 | |
| I | GLY164 | |
| I | CYS167 | |
| I | THR170 | |
| J | GLY164 | |
| J | CYS167 | |
| A | THR170 | |
| J | THR170 | |
| K | GLY164 | |
| K | CYS167 | |
| K | THR170 | |
| L | GLY164 | |
| L | CYS167 | |
| L | THR170 | |
| B | GLY164 | |
| B | CYS167 | |
| B | THR170 | |
| C | GLY164 | |
| C | CYS167 | |
| C | THR170 |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| A | THR6 | |
| A | GLY54 | |
| A | LYS39 | |
| A | SER130 |
| site_id | CSA10 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| J | THR6 | |
| J | GLY54 | |
| J | LYS39 | |
| J | SER130 |
| site_id | CSA11 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| K | THR6 | |
| K | GLY54 | |
| K | LYS39 | |
| K | SER130 |
| site_id | CSA12 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| L | THR6 | |
| L | GLY54 | |
| L | LYS39 | |
| L | SER130 |
| site_id | CSA13 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| A | THR6 | |
| A | GLY51 | |
| A | LYS39 | |
| A | SER130 |
| site_id | CSA14 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| B | THR6 | |
| B | GLY51 | |
| B | LYS39 | |
| B | SER130 |
| site_id | CSA15 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| C | THR6 | |
| C | GLY51 | |
| C | LYS39 | |
| C | SER130 |
| site_id | CSA16 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| D | THR6 | |
| D | GLY51 | |
| D | LYS39 | |
| D | SER130 |
| site_id | CSA17 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| E | THR6 | |
| E | GLY51 | |
| E | LYS39 | |
| E | SER130 |
| site_id | CSA18 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| F | THR6 | |
| F | GLY51 | |
| F | LYS39 | |
| F | SER130 |
| site_id | CSA19 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| G | THR6 | |
| G | GLY51 | |
| G | LYS39 | |
| G | SER130 |
| site_id | CSA2 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| B | THR6 | |
| B | GLY54 | |
| B | LYS39 | |
| B | SER130 |
| site_id | CSA20 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| H | THR6 | |
| H | GLY51 | |
| H | LYS39 | |
| H | SER130 |
| site_id | CSA21 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| I | THR6 | |
| I | GLY51 | |
| I | LYS39 | |
| I | SER130 |
| site_id | CSA22 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| J | THR6 | |
| J | GLY51 | |
| J | LYS39 | |
| J | SER130 |
| site_id | CSA23 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| K | THR6 | |
| K | GLY51 | |
| K | LYS39 | |
| K | SER130 |
| site_id | CSA24 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| L | THR6 | |
| L | GLY51 | |
| L | LYS39 | |
| L | SER130 |
| site_id | CSA3 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| C | THR6 | |
| C | GLY54 | |
| C | LYS39 | |
| C | SER130 |
| site_id | CSA4 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| D | THR6 | |
| D | GLY54 | |
| D | LYS39 | |
| D | SER130 |
| site_id | CSA5 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| E | THR6 | |
| E | GLY54 | |
| E | LYS39 | |
| E | SER130 |
| site_id | CSA6 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| F | THR6 | |
| F | GLY54 | |
| F | LYS39 | |
| F | SER130 |
| site_id | CSA7 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| G | THR6 | |
| G | GLY54 | |
| G | LYS39 | |
| G | SER130 |
| site_id | CSA8 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| H | THR6 | |
| H | GLY54 | |
| H | LYS39 | |
| H | SER130 |
| site_id | CSA9 |
| Number of Residues | 4 |
| Details | Annotated By Reference To The Literature 1pma |
| Chain | Residue | Details |
| I | THR6 | |
| I | GLY54 | |
| I | LYS39 | |
| I | SER130 |
