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2YNG

HIV-1 Reverse Transcriptase in complex with inhibitor GSK560

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003964molecular_functionRNA-directed DNA polymerase activity
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
A0006278biological_processRNA-templated DNA biosynthetic process
B0003964molecular_functionRNA-directed DNA polymerase activity
B0006278biological_processRNA-templated DNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1559
ChainResidue
AASP443
AGLU478
AASP498
AMG1560
AMG1561

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1560
ChainResidue
AMG1559
AASP443
AASP498
AASP549
AARG557

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1561
ChainResidue
AGLY444
AGLU478
AARG557
AMG1559

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE SRT A 1562
ChainResidue
AARG211
AGLY436
AALA437
AASN460
AARG461
AHOH2329
AHOH2331
AHOH2394
BALA288
BTHR290

site_idAC5
Number of Residues15
DetailsBINDING SITE FOR RESIDUE WHU A 1563
ChainResidue
ALYS101
ALYS102
ALYS103
ALYS104
AVAL106
AVAL108
ATYR181
ATYR188
AGLY190
APHE227
ATRP229
ALEU234
AHIS235
APRO236
ATYR318

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
BASP110
BASP185
BASP186

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
BTRP401
BTRP414

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:12206668
ChainResidueDetails
AGLU478
AASP549

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Essential for RT p66/p51 heterodimerization => ECO:0000250
ChainResidueDetails
ATRP401
ATRP414

site_idSWS_FT_FI5
Number of Residues1
DetailsSITE: Cleavage; by viral protease; partial => ECO:0000250
ChainResidueDetails
APHE440

site_idSWS_FT_FI6
Number of Residues1
DetailsSITE: Cleavage; by viral protease => ECO:0000250
ChainResidueDetails
ALEU560

Catalytic Information from CSA
site_idMCSA1
Number of Residues
DetailsM-CSA 175
ChainResidueDetails

222926

PDB entries from 2024-07-24

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