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2YCB

Structure of the archaeal beta-CASP protein with N-terminal KH domains from Methanothermobacter thermautotrophicus

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003723molecular_functionRNA binding
A0004519molecular_functionendonuclease activity
A0004521molecular_functionRNA endonuclease activity
A0004527molecular_functionexonuclease activity
A0004540molecular_functionRNA nuclease activity
A0006353biological_processDNA-templated transcription termination
A0008270molecular_functionzinc ion binding
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0003723molecular_functionRNA binding
B0004519molecular_functionendonuclease activity
B0004521molecular_functionRNA endonuclease activity
B0004527molecular_functionexonuclease activity
B0004540molecular_functionRNA nuclease activity
B0006353biological_processDNA-templated transcription termination
B0008270molecular_functionzinc ion binding
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1637
ChainResidue
AASP246
AHIS247
AASP352
AHIS603
AZN1638
APO41639

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 1638
ChainResidue
AASP352
AZN1637
APO41639
AHIS242
AHIS244
AHIS329

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 A 1639
ChainResidue
AHIS242
AHIS244
AASP246
AHIS247
AHIS329
AASP352
AHIS579
AHIS603
AZN1637
AZN1638

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PO4 A 1640
ChainResidue
AARG135
AARG467
AASP468
AHIS472
APO41641
AZN1642
BHIS472

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PO4 A 1641
ChainResidue
ALYS464
AARG467
AASP468
APO41640
AZN1642
BHIS472

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 1642
ChainResidue
AASP468
AHIS472
APO41640
APO41641
BHIS472

site_idAC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K A 1643
ChainResidue
ALEU225
AVAL227
APHE230

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 1637
ChainResidue
BASP246
BHIS247
BASP352
BHIS603
BZN1638
BPO41639

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN B 1638
ChainResidue
BHIS242
BHIS244
BHIS329
BASP352
BZN1637
BPO41639

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PO4 B 1639
ChainResidue
BHIS242
BHIS244
BASP246
BHIS247
BHIS329
BASP352
BHIS579
BHIS603
BZN1637
BZN1638

site_idBC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE K B 1640
ChainResidue
BLEU225
BVAL227
BPHE230

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00870, ECO:0000269|PubMed:21565697, ECO:0007744|PDB:2YCB
ChainResidueDetails
AHIS242
BASP246
BHIS247
BHIS329
BASP352
BHIS603
AHIS244
AASP246
AHIS247
AHIS329
AASP352
AHIS603
BHIS242
BHIS244

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PDB entries from 2024-10-30

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