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2YBQ

The x-ray structure of the SAM-dependent uroporphyrinogen III methyltransferase NirE from Pseudomonas aeruginosa in complex with SAH and uroporphyrinogen III

Functional Information from GO Data
ChainGOidnamespacecontents
A0004851molecular_functionuroporphyrin-III C-methyltransferase activity
A0006779biological_processporphyrin-containing compound biosynthetic process
A0008168molecular_functionmethyltransferase activity
A0019354biological_processsiroheme biosynthetic process
A0032259biological_processmethylation
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE SAH A 1267
ChainResidue
APRO27
ACYS138
ATYR185
AMET186
AVAL212
AGLN214
AGLY215
AGLN217
APRO242
ATHR243
ALEU244
ALEU52
AUP21268
AHOH2018
AHOH2039
AHOH2123
AGLY103
AGLY104
AASP105
AILE108
APHE109
ATHR133
AALA134

site_idAC2
Number of Residues21
DetailsBINDING SITE FOR RESIDUE UP2 A 1268
ChainResidue
AASP50
AARG51
ALEU52
APHE109
AARG111
AARG149
AHIS161
ALEU162
AGLN163
AMET186
ALEU188
AGLY189
APRO241
ASAH1267
AHOH2042
AHOH2123
AHOH2124
AHOH2125
AHOH2126
AHOH2128
AHOH2129

Functional Information from PROSITE/UniProt
site_idPS00839
Number of Residues15
DetailsSUMT_1 Uroporphyrin-III C-methyltransferase signature 1. VGAGPGdpgLLTLRA
ChainResidueDetails
AVAL23-ALA37

site_idPS00840
Number of Residues34
DetailsSUMT_2 Uroporphyrin-III C-methyltransferase signature 2. VvrLkgGDpfiFGrgaeelerLleagvdCqVvPG
ChainResidueDetails
AVAL98-GLY131

221051

PDB entries from 2024-06-12

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