| Chain | GOid | namespace | contents |
| B | 0000122 | biological_process | negative regulation of transcription by RNA polymerase II |
| B | 0000976 | molecular_function | transcription cis-regulatory region binding |
| B | 0005515 | molecular_function | protein binding |
| B | 0005634 | cellular_component | nucleus |
| B | 0005667 | cellular_component | transcription regulator complex |
| B | 0005700 | cellular_component | polytene chromosome |
| B | 0006325 | biological_process | chromatin organization |
| B | 0006335 | biological_process | DNA replication-dependent chromatin assembly |
| B | 0006338 | biological_process | chromatin remodeling |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0007307 | biological_process | eggshell chorion gene amplification |
| B | 0007346 | biological_process | regulation of mitotic cell cycle |
| B | 0007379 | biological_process | segment specification |
| B | 0016581 | cellular_component | NuRD complex |
| B | 0016589 | cellular_component | NURF complex |
| B | 0031491 | molecular_function | nucleosome binding |
| B | 0031507 | biological_process | heterochromatin formation |
| B | 0031523 | cellular_component | Myb complex |
| B | 0033186 | cellular_component | CAF-1 complex |
| B | 0034728 | biological_process | nucleosome organization |
| B | 0035097 | cellular_component | histone methyltransferase complex |
| B | 0035098 | cellular_component | ESC/E(Z) complex |
| B | 0042393 | molecular_function | histone binding |
| B | 0042803 | molecular_function | protein homodimerization activity |
| B | 0042826 | molecular_function | histone deacetylase binding |
| B | 0045892 | biological_process | negative regulation of DNA-templated transcription |
| B | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| B | 0070822 | cellular_component | Sin3-type complex |
| B | 0090575 | cellular_component | RNA polymerase II transcription regulator complex |
| B | 0140718 | biological_process | facultative heterochromatin formation |
