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2Y8E

Crystal structure of D. melanogaster Rab6 GTPase bound to GMPPNP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003924molecular_functionGTPase activity
A0005525molecular_functionGTP binding
B0003924molecular_functionGTPase activity
B0005525molecular_functionGTP binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 1175
ChainResidue
ALYS12
ALYS14
ALYS14
AARG114
AHOH2056
AHOH2115
AHOH2116

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 B 1174
ChainResidue
BARG133
BHOH2014
BHOH2095
BHOH2096
BHOH2097
BHOH2099
BARG31
BSER130

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 1175
ChainResidue
BTYR160
BASN161
BLYS163
BARG168
BHOH2087
BHOH2100
BHOH2101

site_idAC4
Number of Residues28
DetailsBINDING SITE FOR RESIDUE GNP A 1176
ChainResidue
AGLN21
ASER22
AVAL23
AGLY24
ALYS25
ATHR26
ASER27
APHE37
AASP38
AASN39
ATYR41
ATHR44
AGLY70
AASN125
ALYS126
AASP128
ALEU129
ASER155
AALA156
ALYS157
AMG1177
AHOH2025
AHOH2039
AHOH2081
AHOH2117
AHOH2118
AHOH2119
AHOH2120

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1177
ChainResidue
ATHR26
ATHR44
AGNP1176
AHOH2039
AHOH2120

site_idAC6
Number of Residues29
DetailsBINDING SITE FOR RESIDUE GNP B 1176
ChainResidue
BGLN21
BSER22
BVAL23
BGLY24
BLYS25
BTHR26
BSER27
BPHE37
BASP38
BASN39
BTYR41
BALA43
BTHR44
BGLY70
BASN125
BLYS126
BASP128
BLEU129
BSER155
BALA156
BLYS157
BMG1177
BHOH2040
BHOH2064
BHOH2102
BHOH2103
BHOH2104
BHOH2105
BHOH2106

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG B 1177
ChainResidue
BTHR26
BTHR44
BGNP1176
BHOH2040
BHOH2105

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING:
ChainResidueDetails
AGLY19
AASP67
AASN125
ASER155
BGLY19
BASP67
BASN125
BSER155

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PDB entries from 2024-06-12

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