2Y69
Bovine heart cytochrome c oxidase re-refined with molecular oxygen
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004129 | molecular_function | cytochrome-c oxidase activity |
A | 0005739 | cellular_component | mitochondrion |
A | 0005743 | cellular_component | mitochondrial inner membrane |
A | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
A | 0006119 | biological_process | oxidative phosphorylation |
A | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
A | 0009060 | biological_process | aerobic respiration |
A | 0015990 | biological_process | electron transport coupled proton transport |
A | 0016020 | cellular_component | membrane |
A | 0020037 | molecular_function | heme binding |
A | 0045277 | cellular_component | respiratory chain complex IV |
A | 0046872 | molecular_function | metal ion binding |
A | 0070469 | cellular_component | respirasome |
B | 0004129 | molecular_function | cytochrome-c oxidase activity |
B | 0005507 | molecular_function | copper ion binding |
B | 0005739 | cellular_component | mitochondrion |
B | 0005743 | cellular_component | mitochondrial inner membrane |
B | 0016020 | cellular_component | membrane |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0022900 | biological_process | electron transport chain |
B | 0042773 | biological_process | ATP synthesis coupled electron transport |
B | 0045277 | cellular_component | respiratory chain complex IV |
B | 0046872 | molecular_function | metal ion binding |
B | 0070469 | cellular_component | respirasome |
B | 1902600 | biological_process | proton transmembrane transport |
C | 0004129 | molecular_function | cytochrome-c oxidase activity |
C | 0005739 | cellular_component | mitochondrion |
C | 0005743 | cellular_component | mitochondrial inner membrane |
C | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
C | 0008535 | biological_process | respiratory chain complex IV assembly |
C | 0009055 | molecular_function | electron transfer activity |
C | 0016020 | cellular_component | membrane |
C | 0019646 | biological_process | aerobic electron transport chain |
C | 0022904 | biological_process | respiratory electron transport chain |
C | 0045277 | cellular_component | respiratory chain complex IV |
C | 1902600 | biological_process | proton transmembrane transport |
D | 0004129 | molecular_function | cytochrome-c oxidase activity |
D | 0005739 | cellular_component | mitochondrion |
D | 0005743 | cellular_component | mitochondrial inner membrane |
D | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
D | 0006119 | biological_process | oxidative phosphorylation |
D | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
D | 0045277 | cellular_component | respiratory chain complex IV |
D | 1902600 | biological_process | proton transmembrane transport |
E | 0004129 | molecular_function | cytochrome-c oxidase activity |
E | 0005739 | cellular_component | mitochondrion |
E | 0005743 | cellular_component | mitochondrial inner membrane |
E | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
E | 0006119 | biological_process | oxidative phosphorylation |
E | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
E | 0045277 | cellular_component | respiratory chain complex IV |
E | 0046872 | molecular_function | metal ion binding |
E | 1902600 | biological_process | proton transmembrane transport |
F | 0005739 | cellular_component | mitochondrion |
F | 0005740 | cellular_component | mitochondrial envelope |
F | 0005743 | cellular_component | mitochondrial inner membrane |
F | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
F | 0006119 | biological_process | oxidative phosphorylation |
F | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
F | 0045277 | cellular_component | respiratory chain complex IV |
F | 0046872 | molecular_function | metal ion binding |
G | 0005739 | cellular_component | mitochondrion |
G | 0005743 | cellular_component | mitochondrial inner membrane |
G | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
G | 0006119 | biological_process | oxidative phosphorylation |
G | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
G | 0016491 | molecular_function | oxidoreductase activity |
G | 0030234 | molecular_function | enzyme regulator activity |
G | 0045277 | cellular_component | respiratory chain complex IV |
H | 0005739 | cellular_component | mitochondrion |
H | 0005743 | cellular_component | mitochondrial inner membrane |
H | 0006119 | biological_process | oxidative phosphorylation |
H | 0045277 | cellular_component | respiratory chain complex IV |
I | 0005739 | cellular_component | mitochondrion |
I | 0005743 | cellular_component | mitochondrial inner membrane |
I | 0006119 | biological_process | oxidative phosphorylation |
I | 0045277 | cellular_component | respiratory chain complex IV |
J | 0002082 | biological_process | regulation of oxidative phosphorylation |
J | 0005739 | cellular_component | mitochondrion |
J | 0005743 | cellular_component | mitochondrial inner membrane |
J | 0005746 | cellular_component | mitochondrial respirasome |
J | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
J | 0006119 | biological_process | oxidative phosphorylation |
J | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
J | 0016491 | molecular_function | oxidoreductase activity |
J | 0045277 | cellular_component | respiratory chain complex IV |
J | 0097250 | biological_process | mitochondrial respirasome assembly |
K | 0005739 | cellular_component | mitochondrion |
K | 0005743 | cellular_component | mitochondrial inner membrane |
K | 0005746 | cellular_component | mitochondrial respirasome |
K | 0006119 | biological_process | oxidative phosphorylation |
K | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
K | 0007417 | biological_process | central nervous system development |
K | 0045277 | cellular_component | respiratory chain complex IV |
L | 0005739 | cellular_component | mitochondrion |
L | 0005743 | cellular_component | mitochondrial inner membrane |
L | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
L | 0006119 | biological_process | oxidative phosphorylation |
L | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
L | 0045277 | cellular_component | respiratory chain complex IV |
M | 0005739 | cellular_component | mitochondrion |
M | 0005743 | cellular_component | mitochondrial inner membrane |
M | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
M | 0006119 | biological_process | oxidative phosphorylation |
M | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
M | 0045277 | cellular_component | respiratory chain complex IV |
N | 0004129 | molecular_function | cytochrome-c oxidase activity |
N | 0005739 | cellular_component | mitochondrion |
N | 0005743 | cellular_component | mitochondrial inner membrane |
N | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
N | 0006119 | biological_process | oxidative phosphorylation |
N | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
N | 0009060 | biological_process | aerobic respiration |
N | 0015990 | biological_process | electron transport coupled proton transport |
N | 0016020 | cellular_component | membrane |
N | 0020037 | molecular_function | heme binding |
N | 0045277 | cellular_component | respiratory chain complex IV |
N | 0046872 | molecular_function | metal ion binding |
N | 0070469 | cellular_component | respirasome |
O | 0004129 | molecular_function | cytochrome-c oxidase activity |
O | 0005507 | molecular_function | copper ion binding |
O | 0005739 | cellular_component | mitochondrion |
O | 0005743 | cellular_component | mitochondrial inner membrane |
O | 0016020 | cellular_component | membrane |
O | 0016491 | molecular_function | oxidoreductase activity |
O | 0022900 | biological_process | electron transport chain |
O | 0042773 | biological_process | ATP synthesis coupled electron transport |
O | 0045277 | cellular_component | respiratory chain complex IV |
O | 0046872 | molecular_function | metal ion binding |
O | 0070469 | cellular_component | respirasome |
O | 1902600 | biological_process | proton transmembrane transport |
P | 0004129 | molecular_function | cytochrome-c oxidase activity |
P | 0005739 | cellular_component | mitochondrion |
P | 0005743 | cellular_component | mitochondrial inner membrane |
P | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
P | 0008535 | biological_process | respiratory chain complex IV assembly |
P | 0009055 | molecular_function | electron transfer activity |
P | 0016020 | cellular_component | membrane |
P | 0019646 | biological_process | aerobic electron transport chain |
P | 0022904 | biological_process | respiratory electron transport chain |
P | 0045277 | cellular_component | respiratory chain complex IV |
P | 1902600 | biological_process | proton transmembrane transport |
Q | 0004129 | molecular_function | cytochrome-c oxidase activity |
Q | 0005739 | cellular_component | mitochondrion |
Q | 0005743 | cellular_component | mitochondrial inner membrane |
Q | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
Q | 0006119 | biological_process | oxidative phosphorylation |
Q | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
Q | 0045277 | cellular_component | respiratory chain complex IV |
Q | 1902600 | biological_process | proton transmembrane transport |
R | 0004129 | molecular_function | cytochrome-c oxidase activity |
R | 0005739 | cellular_component | mitochondrion |
R | 0005743 | cellular_component | mitochondrial inner membrane |
R | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
R | 0006119 | biological_process | oxidative phosphorylation |
R | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
R | 0045277 | cellular_component | respiratory chain complex IV |
R | 0046872 | molecular_function | metal ion binding |
R | 1902600 | biological_process | proton transmembrane transport |
S | 0005739 | cellular_component | mitochondrion |
S | 0005740 | cellular_component | mitochondrial envelope |
S | 0005743 | cellular_component | mitochondrial inner membrane |
S | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
S | 0006119 | biological_process | oxidative phosphorylation |
S | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
S | 0045277 | cellular_component | respiratory chain complex IV |
S | 0046872 | molecular_function | metal ion binding |
T | 0005739 | cellular_component | mitochondrion |
T | 0005743 | cellular_component | mitochondrial inner membrane |
T | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
T | 0006119 | biological_process | oxidative phosphorylation |
T | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
T | 0016491 | molecular_function | oxidoreductase activity |
T | 0030234 | molecular_function | enzyme regulator activity |
T | 0045277 | cellular_component | respiratory chain complex IV |
U | 0005739 | cellular_component | mitochondrion |
U | 0005743 | cellular_component | mitochondrial inner membrane |
U | 0006119 | biological_process | oxidative phosphorylation |
U | 0045277 | cellular_component | respiratory chain complex IV |
V | 0005739 | cellular_component | mitochondrion |
V | 0005743 | cellular_component | mitochondrial inner membrane |
V | 0006119 | biological_process | oxidative phosphorylation |
V | 0045277 | cellular_component | respiratory chain complex IV |
W | 0002082 | biological_process | regulation of oxidative phosphorylation |
W | 0005739 | cellular_component | mitochondrion |
W | 0005743 | cellular_component | mitochondrial inner membrane |
W | 0005746 | cellular_component | mitochondrial respirasome |
W | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
W | 0006119 | biological_process | oxidative phosphorylation |
W | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
W | 0016491 | molecular_function | oxidoreductase activity |
W | 0045277 | cellular_component | respiratory chain complex IV |
W | 0097250 | biological_process | mitochondrial respirasome assembly |
X | 0005739 | cellular_component | mitochondrion |
X | 0005743 | cellular_component | mitochondrial inner membrane |
X | 0005746 | cellular_component | mitochondrial respirasome |
X | 0006119 | biological_process | oxidative phosphorylation |
X | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
X | 0007417 | biological_process | central nervous system development |
X | 0045277 | cellular_component | respiratory chain complex IV |
Y | 0005739 | cellular_component | mitochondrion |
Y | 0005743 | cellular_component | mitochondrial inner membrane |
Y | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
Y | 0006119 | biological_process | oxidative phosphorylation |
Y | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
Y | 0045277 | cellular_component | respiratory chain complex IV |
Z | 0005739 | cellular_component | mitochondrion |
Z | 0005743 | cellular_component | mitochondrial inner membrane |
Z | 0005751 | cellular_component | mitochondrial respiratory chain complex IV |
Z | 0006119 | biological_process | oxidative phosphorylation |
Z | 0006123 | biological_process | mitochondrial electron transport, cytochrome c to oxygen |
Z | 0045277 | cellular_component | respiratory chain complex IV |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 33 |
Details | BINDING SITE FOR RESIDUE HEA A 515 |
Chain | Residue |
A | MET28 |
A | MET65 |
A | ILE66 |
A | MET69 |
A | VAL70 |
A | ILE73 |
A | GLY125 |
A | TRP126 |
A | TYR371 |
A | PHE377 |
A | HIS378 |
A | THR31 |
A | SER382 |
A | VAL386 |
A | PHE393 |
A | MET417 |
A | PHE425 |
A | GLN428 |
A | ARG438 |
A | ARG439 |
A | TYR440 |
A | SER458 |
A | SER34 |
A | VAL465 |
A | MET468 |
A | HOH2083 |
A | HOH2110 |
A | ILE37 |
A | ARG38 |
A | TYR54 |
A | VAL58 |
A | HIS61 |
A | ALA62 |
site_id | AC2 |
Number of Residues | 29 |
Details | BINDING SITE FOR RESIDUE HEA A 516 |
Chain | Residue |
A | TRP126 |
A | TRP236 |
A | VAL243 |
A | TYR244 |
A | HIS290 |
A | HIS291 |
A | THR309 |
A | THR316 |
A | GLY317 |
A | PHE348 |
A | THR349 |
A | GLY352 |
A | LEU353 |
A | GLY355 |
A | ILE356 |
A | LEU358 |
A | ALA359 |
A | ASP364 |
A | HIS368 |
A | VAL373 |
A | HIS376 |
A | PHE377 |
A | VAL380 |
A | LEU381 |
A | ARG438 |
A | OXY1515 |
A | HOH2111 |
A | HOH2112 |
A | HOH2113 |
site_id | AC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CU A 517 |
Chain | Residue |
A | HIS240 |
A | HIS290 |
A | HIS291 |
A | OXY1515 |
site_id | AC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE OXY A 1515 |
Chain | Residue |
A | HIS240 |
A | VAL243 |
A | HIS291 |
A | HEA516 |
A | CU517 |
site_id | AC5 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 1516 |
Chain | Residue |
A | HIS368 |
A | ASP369 |
B | GLU198 |
B | HOH2079 |
B | HOH2089 |
B | HOH2090 |
site_id | AC6 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CHD A 1517 |
Chain | Residue |
A | HIS233 |
A | ASP300 |
A | THR301 |
A | TYR304 |
A | HOH2114 |
C | TRP99 |
C | HIS103 |
site_id | AC7 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CUA B 228 |
Chain | Residue |
B | HIS161 |
B | CYS196 |
B | GLU198 |
B | CYS200 |
B | HIS204 |
B | MET207 |
site_id | AC8 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PEK C 1262 |
Chain | Residue |
G | TRP62 |
G | THR68 |
G | PHE69 |
G | PHE70 |
G | HIS71 |
G | ASN76 |
G | HOH2032 |
A | HIS151 |
A | VAL155 |
C | TYR181 |
C | TYR182 |
C | ALA184 |
C | PHE186 |
C | THR187 |
C | ILE188 |
C | PHE198 |
site_id | AC9 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PGV C 1263 |
Chain | Residue |
A | PHE94 |
A | PRO95 |
A | ARG96 |
A | MET97 |
A | MET100 |
A | HOH2020 |
C | HIS9 |
C | ALA24 |
C | ASN50 |
C | MET54 |
C | TRP57 |
C | TRP58 |
C | GLU64 |
C | HIS71 |
C | GLY82 |
C | HOH2040 |
site_id | BC1 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PGV C 1264 |
Chain | Residue |
C | TRP58 |
C | VAL61 |
C | SER65 |
C | THR66 |
C | PHE86 |
C | ILE210 |
C | PHE214 |
C | ARG221 |
C | HIS226 |
C | THR228 |
C | HIS231 |
C | PHE233 |
C | GLY234 |
C | HOH2080 |
C | HOH2085 |
F | HOH2011 |
F | HOH2017 |
site_id | BC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CHD C 1265 |
Chain | Residue |
C | ARG156 |
C | PHE164 |
C | PHE219 |
J | PHE1 |
site_id | BC3 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN F 1097 |
Chain | Residue |
F | CYS60 |
F | CYS62 |
F | CYS82 |
F | CYS85 |
site_id | BC4 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE CHD G 1085 |
Chain | Residue |
G | ARG14 |
G | ARG17 |
G | GLY22 |
G | HOH2007 |
G | HOH2041 |
N | MET271 |
O | GLU62 |
O | THR63 |
O | HOH2025 |
site_id | BC5 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE DMU M 1044 |
Chain | Residue |
D | TRP98 |
M | LEU27 |
M | LEU28 |
M | GLY31 |
M | TRP32 |
M | TYR35 |
M | HIS36 |
site_id | BC6 |
Number of Residues | 27 |
Details | BINDING SITE FOR RESIDUE HEA N 515 |
Chain | Residue |
N | GLY27 |
N | MET28 |
N | THR31 |
N | SER34 |
N | ILE37 |
N | ARG38 |
N | TYR54 |
N | VAL58 |
N | HIS61 |
N | ALA62 |
N | MET65 |
N | ILE66 |
N | VAL70 |
N | GLY125 |
N | TRP126 |
N | TYR371 |
N | PHE377 |
N | HIS378 |
N | SER382 |
N | PHE425 |
N | GLN428 |
N | ARG438 |
N | ARG439 |
N | TYR440 |
N | HOH2092 |
N | HOH2113 |
N | HOH2114 |
site_id | BC7 |
Number of Residues | 30 |
Details | BINDING SITE FOR RESIDUE HEA N 516 |
Chain | Residue |
N | TRP126 |
N | TRP236 |
N | VAL243 |
N | TYR244 |
N | HIS290 |
N | HIS291 |
N | THR309 |
N | ILE312 |
N | ALA313 |
N | THR316 |
N | GLY317 |
N | GLY352 |
N | LEU353 |
N | GLY355 |
N | ILE356 |
N | LEU358 |
N | ALA359 |
N | ASP364 |
N | HIS368 |
N | VAL373 |
N | HIS376 |
N | PHE377 |
N | VAL380 |
N | LEU381 |
N | ARG438 |
N | OXY1515 |
N | HOH2067 |
N | HOH2115 |
N | HOH2116 |
N | HOH2117 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CU N 517 |
Chain | Residue |
N | HIS240 |
N | HIS290 |
N | HIS291 |
N | OXY1515 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE OXY N 1515 |
Chain | Residue |
N | HIS240 |
N | VAL243 |
N | HIS291 |
N | HEA516 |
N | CU517 |
site_id | CC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG N 1516 |
Chain | Residue |
N | HIS368 |
N | ASP369 |
N | HOH2076 |
O | GLU198 |
O | HOH2069 |
O | HOH2080 |
site_id | CC2 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CHD N 1517 |
Chain | Residue |
N | HIS233 |
N | ASP300 |
N | THR301 |
N | TYR304 |
N | HOH2118 |
P | TRP99 |
P | HIS103 |
site_id | CC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE CUA O 228 |
Chain | Residue |
O | HIS161 |
O | CYS196 |
O | GLU198 |
O | CYS200 |
O | HIS204 |
O | MET207 |
site_id | CC4 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PEK P 1262 |
Chain | Residue |
N | LEU215 |
P | TYR181 |
P | TYR182 |
P | ALA184 |
P | PHE186 |
P | THR187 |
P | ILE188 |
P | PHE198 |
P | PGV1263 |
T | TRP62 |
T | THR68 |
T | PHE69 |
T | PHE70 |
T | HIS71 |
T | ASN76 |
site_id | CC5 |
Number of Residues | 21 |
Details | BINDING SITE FOR RESIDUE PGV P 1263 |
Chain | Residue |
N | PHE94 |
N | PRO95 |
N | ARG96 |
N | MET97 |
N | MET100 |
N | HIS151 |
N | LEU152 |
N | VAL155 |
P | HIS9 |
P | ALA24 |
P | ASN50 |
P | MET54 |
P | TRP57 |
P | TRP58 |
P | GLU64 |
P | HIS71 |
P | LEU79 |
P | GLY82 |
P | MET83 |
P | PEK1262 |
P | PGV1264 |
site_id | CC6 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PGV P 1264 |
Chain | Residue |
P | TRP58 |
P | VAL61 |
P | SER65 |
P | THR66 |
P | HIS207 |
P | ILE210 |
P | THR213 |
P | PHE214 |
P | ARG221 |
P | HIS226 |
P | PHE227 |
P | THR228 |
P | HIS231 |
P | PHE233 |
P | GLY234 |
P | PGV1263 |
site_id | CC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE CHD P 1265 |
Chain | Residue |
P | ARG156 |
P | PHE164 |
P | PHE219 |
W | PHE1 |
site_id | CC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE ZN S 1097 |
Chain | Residue |
S | CYS60 |
S | CYS62 |
S | CYS82 |
S | CYS85 |
site_id | CC9 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE CHD T 1085 |
Chain | Residue |
A | MET271 |
A | TRP275 |
B | GLU62 |
B | THR63 |
T | ARG14 |
T | ARG17 |
T | GLY22 |
site_id | DC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE DMU Z 1043 |
Chain | Residue |
Q | TRP98 |
Q | TYR102 |
Z | LEU27 |
Z | LEU28 |
Z | GLY31 |
Z | TRP32 |
Z | TYR35 |
Functional Information from PROSITE/UniProt
site_id | PS00077 |
Number of Residues | 56 |
Details | COX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WFFGHPeVyililpgfgmishivtyysgkkepfgymgmvwammsigflgfivwa.HH |
Chain | Residue | Details |
A | TRP236-HIS291 |
site_id | PS00078 |
Number of Residues | 49 |
Details | COX2 CO II and nitrous oxide reductase dinuclear copper centers signature. VlHswavpslglktdaipgrlnqttlmssrpglyygq......CseiCgsnHsfM |
Chain | Residue | Details |
B | VAL159-MET207 |
site_id | PS00848 |
Number of Residues | 23 |
Details | COX5B_1 Cytochrome c oxidase subunit Vb, zinc binding region signature. VIWfwlhkgeaqrCpsCGthYKL |
Chain | Residue | Details |
F | VAL69-LEU91 |
site_id | PS01329 |
Number of Residues | 18 |
Details | COX6A Cytochrome c oxidase subunit VIa signature. IRtKpFsWGDGnHTfFhN |
Chain | Residue | Details |
G | ILE55-ASN72 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 20 |
Details | TOPO_DOM: Mitochondrial matrix => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
M | ILE1-SER11 | |
N | SER262-GLY269 | |
N | SER401-ASN406 | |
N | LYS479-LYS514 | |
Z | ILE1-SER11 | |
F | CYS82 | |
F | CYS85 | |
S | CYS60 | |
S | CYS62 | |
S | CYS82 | |
S | CYS85 | |
N | MET171-PRO182 |
site_id | SWS_FT_FI2 |
Number of Residues | 46 |
Details | TRANSMEM: Helical => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
M | PRO12-TYR35 | |
Z | PRO12-TYR35 | |
F | LYS90 | |
S | LYS37 | |
S | LYS55 | |
S | LYS90 |
site_id | SWS_FT_FI3 |
Number of Residues | 20 |
Details | TOPO_DOM: Mitochondrial intermembrane => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
M | HIS36-ALA46 | |
Z | HIS36-ALA46 | |
C | ALA184-ASP190 | |
C | TYR257-SER261 | |
P | PHE35-MET40 | |
P | LEU106-GLU128 | |
P | ALA184-ASP190 | |
P | TYR257-SER261 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | MOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P17665 |
Chain | Residue | Details |
L | LYS9 | |
Y | LYS9 | |
Q | LYS7 | |
Q | LYS38 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P13073 |
Chain | Residue | Details |
D | LYS31 | |
O | CYS200 | |
O | HIS204 | |
O | MET207 | |
Q | LYS31 | |
B | GLU198 | |
B | CYS200 | |
B | HIS204 | |
B | MET207 | |
O | HIS161 | |
O | CYS196 | |
O | GLU198 |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P10888 |
Chain | Residue | Details |
D | SER34 | |
D | SER36 | |
Q | SER34 | |
Q | SER36 | |
N | ARG213-ASP227 | |
N | VAL287-ASP298 |
site_id | SWS_FT_FI7 |
Number of Residues | 2 |
Details | MOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P19783 |
Chain | Residue | Details |
D | LYS45 | |
Q | LYS45 |
site_id | SWS_FT_FI8 |
Number of Residues | 64 |
Details | TRANSMEM: Helical; Name=VI => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
C | GLY191-LEU223 | |
P | GLY191-LEU223 |
site_id | SWS_FT_FI9 |
Number of Residues | 46 |
Details | TRANSMEM: Helical; Name=VII => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
C | PHE233-ILE256 | |
P | PHE233-ILE256 |
site_id | SWS_FT_FI10 |
Number of Residues | 32 |
Details | TRANSMEM: Helical; Name=VII => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | TYR270-ILE286 | |
N | TYR270-ILE286 |
site_id | SWS_FT_FI11 |
Number of Residues | 56 |
Details | TRANSMEM: Helical; Name=VIII => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | VAL299-LEU327 | |
N | VAL299-LEU327 |
site_id | SWS_FT_FI12 |
Number of Residues | 14 |
Details | TOPO_DOM: Mitochondrial matrix => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | HIS328-SER335 | |
N | HIS328-SER335 |
site_id | SWS_FT_FI13 |
Number of Residues | 42 |
Details | TRANSMEM: Helical; Name=IX => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | PRO336-VAL357 | |
N | PRO336-VAL357 |
site_id | SWS_FT_FI14 |
Number of Residues | 48 |
Details | TOPO_DOM: Mitochondrial intermembrane => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | LEU358-THR370 | |
A | SER434-ALA446 | |
N | LEU358-THR370 | |
N | SER434-ALA446 |
site_id | SWS_FT_FI15 |
Number of Residues | 58 |
Details | TRANSMEM: Helical; Name=X => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | TYR371-PHE400 | |
N | TYR371-PHE400 |
site_id | SWS_FT_FI16 |
Number of Residues | 52 |
Details | TRANSMEM: Helical; Name=XI => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | ASP407-LEU433 | |
N | ASP407-LEU433 |
site_id | SWS_FT_FI17 |
Number of Residues | 62 |
Details | TRANSMEM: Helical; Name=XII => ECO:0000269|PubMed:27605664 |
Chain | Residue | Details |
A | TYR447-SER478 | |
N | TYR447-SER478 |
site_id | SWS_FT_FI18 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000269|PubMed:27605664, ECO:0000305|PubMed:23537388 |
Chain | Residue | Details |
A | GLU40 | |
A | GLY45 | |
A | SER441 | |
N | GLU40 | |
N | GLY45 | |
N | SER441 |
site_id | SWS_FT_FI19 |
Number of Residues | 6 |
Details | BINDING: axial binding residue => ECO:0000269|PubMed:20385840, ECO:0000269|PubMed:8638158 |
Chain | Residue | Details |
A | HIS61 | |
A | HIS376 | |
A | HIS378 | |
N | HIS61 | |
N | HIS376 | |
N | HIS378 |
site_id | SWS_FT_FI20 |
Number of Residues | 10 |
Details | BINDING: BINDING => ECO:0000269|PubMed:20385840, ECO:0000269|PubMed:8638158 |
Chain | Residue | Details |
A | HIS240 | |
N | ASP369 | |
A | HIS290 | |
A | HIS291 | |
A | HIS368 | |
A | ASP369 | |
N | HIS240 | |
N | HIS290 | |
N | HIS291 | |
N | HIS368 |
site_id | SWS_FT_FI21 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000305 |
Chain | Residue | Details |
A | TYR244 | |
N | TYR244 |
site_id | SWS_FT_FI22 |
Number of Residues | 2 |
Details | MOD_RES: N-formylmethionine => ECO:0000269|PubMed:2165784 |
Chain | Residue | Details |
A | MET1 | |
N | MET1 |
site_id | SWS_FT_FI23 |
Number of Residues | 4 |
Details | CROSSLNK: 1'-histidyl-3'-tyrosine (His-Tyr) => ECO:0000269|PubMed:10338009 |
Chain | Residue | Details |
A | HIS240 | |
A | TYR244 | |
N | HIS240 | |
N | TYR244 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 14 |
Details | M-CSA 124 |
Chain | Residue | Details |
A | HIS61 | metal ligand |
A | HIS290 | metal ligand |
A | HIS291 | metal ligand, proton acceptor, proton donor |
A | THR316 | proton acceptor, proton donor, proton relay |
A | LYS319 | proton acceptor, proton donor, proton relay |
A | ARG438 | proton acceptor, proton donor, proton relay |
A | ASP91 | proton acceptor, proton donor, proton relay |
A | TRP126 | proton acceptor, proton donor, proton relay |
A | SER156 | proton acceptor, proton donor, proton relay |
A | SER157 | proton acceptor, proton donor, proton relay |
A | HIS240 | covalently attached, electrostatic stabiliser, metal ligand, radical stabiliser |
A | GLU242 | proton acceptor, proton donor, proton relay |
A | TYR244 | covalently attached, hydrogen radical donor, proton acceptor, proton donor, proton relay, single electron acceptor |
A | SER255 | proton acceptor, proton donor, proton relay |
site_id | MCSA2 |
Number of Residues | 14 |
Details | M-CSA 124 |
Chain | Residue | Details |
N | HIS61 | metal ligand |
N | HIS290 | metal ligand |
N | HIS291 | metal ligand, proton acceptor, proton donor |
N | THR316 | proton acceptor, proton donor, proton relay |
N | LYS319 | proton acceptor, proton donor, proton relay |
N | ARG438 | proton acceptor, proton donor, proton relay |
N | ASP91 | proton acceptor, proton donor, proton relay |
N | TRP126 | proton acceptor, proton donor, proton relay |
N | SER156 | proton acceptor, proton donor, proton relay |
N | SER157 | proton acceptor, proton donor, proton relay |
N | HIS240 | covalently attached, electrostatic stabiliser, metal ligand, radical stabiliser |
N | GLU242 | proton acceptor, proton donor, proton relay |
N | TYR244 | covalently attached, hydrogen radical donor, proton acceptor, proton donor, proton relay, single electron acceptor |
N | SER255 | proton acceptor, proton donor, proton relay |