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2Y4E

X-ray crystallographic structure of E. coli ppix-EfeB

Replaces:  2WX7
Functional Information from GO Data
ChainGOidnamespacecontents
A0004325molecular_functionferrochelatase activity
A0004601molecular_functionperoxidase activity
A0005829cellular_componentcytosol
A0006974biological_processDNA damage response
A0016829molecular_functionlyase activity
A0020037molecular_functionheme binding
A0030288cellular_componentouter membrane-bounded periplasmic space
A0033212biological_processiron import into cell
A0042597cellular_componentperiplasmic space
A0046872molecular_functionmetal ion binding
A0098869biological_processcellular oxidant detoxification
B0004325molecular_functionferrochelatase activity
B0004601molecular_functionperoxidase activity
B0005829cellular_componentcytosol
B0006974biological_processDNA damage response
B0016829molecular_functionlyase activity
B0020037molecular_functionheme binding
B0030288cellular_componentouter membrane-bounded periplasmic space
B0033212biological_processiron import into cell
B0042597cellular_componentperiplasmic space
B0046872molecular_functionmetal ion binding
B0098869biological_processcellular oxidant detoxification
Functional Information from PDB Data
site_idAC1
Number of Residues23
DetailsBINDING SITE FOR RESIDUE PP9 A 1389
ChainResidue
AASN194
AILE295
AASN299
AARG301
ASER307
AMET310
AARG312
APHE333
APHE344
AVAL347
AGLN348
ALYS199
ALEU351
ALEU356
AVAL360
AHOH2116
AASP200
AGLY201
ATHR202
AALA203
APHE259
AARG261
AHIS294

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1390
ChainResidue
AARG15
AASN16
ATHR126
AARG127
AHOH2009

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PG4 A 1391
ChainResidue
AALA135
AALA136
AARG172
BASN323
BSER324

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE PG4 A 1392
ChainResidue
AASP43
AVAL44
AHIS105
ASER106
AASP109
AARG111
AASP141
AHOH2166

site_idAC5
Number of Residues21
DetailsBINDING SITE FOR RESIDUE PP9 B 1389
ChainResidue
BASN194
BLYS199
BASP200
BGLY201
BTHR202
BALA203
BPHE259
BARG261
BHIS294
BILE295
BASN299
BARG312
BPHE333
BPHE344
BVAL347
BGLN348
BLEU351
BLEU356
BVAL360
BHOH2028
BHOH2084

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B 1390
ChainResidue
AGLY320
AVAL321
BLEU137
BARG175
BHOH2090
BHOH2092

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|Ref.11, ECO:0007744|PDB:2Y4E
ChainResidueDetails
AGLY201
AARG261
BGLY201
BARG261

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: proximal binding residue => ECO:0000269|Ref.11, ECO:0007744|PDB:2Y4F
ChainResidueDetails
AHIS294
BHIS294

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|Ref.11, ECO:0007744|PDB:2Y4F
ChainResidueDetails
AASN299
AARG312
BASN299
BARG312

222036

PDB entries from 2024-07-03

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