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2Y2Q

PENICILLIN-BINDING PROTEIN 1B (PBP-1B) IN COMPLEX WITH AN ALKYL BORONATE (Z06)

Functional Information from GO Data
ChainGOidnamespacecontents
A0008658molecular_functionpenicillin binding
B0008658molecular_functionpenicillin binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE Z06 A 1000
ChainResidue
AALA459
ATHR654
ANA1300
AHOH2086
AHOH2237
ASER460
AMET497
ATYR498
AALA499
ASER516
AASN518
AMET556
AGLY653

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 1100
ChainResidue
ATHR563
ALYS583
AHOH2238
AHOH2239
AHOH2240

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1200
ChainResidue
AARG529
BARG529

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1201
ChainResidue
AVAL535
ALYS536
AHOH2099

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1202
ChainResidue
AARG627
ALYS633

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1203
ChainResidue
AASN759
ALYS760
ASER761

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1204
ChainResidue
AASN514
ATYR515

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1205
ChainResidue
ASER111
AASP112
AGLN396

site_idAC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1206
ChainResidue
AALA592
AASP593

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL A 1207
ChainResidue
ASER775
AASP776
AALA777

site_idBC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1208
ChainResidue
AGLU727
ALYS735

site_idBC3
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 1209
ChainResidue
ALYS725

site_idBC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE CL A 1211
ChainResidue
ATYR544
AGLU545
AVAL562
AHOH2110
AHOH2240

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1212
ChainResidue
AGLU346
AVAL585
AILE586
AHOH2133

site_idBC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA A 1300
ChainResidue
ATHR652
AGLY653
ATHR654
AZ061000

site_idBC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 1400
ChainResidue
AGLU480
ALEU619
AGLU622
ATYR756
AHOH2073
AHOH2074
AHOH2154
AHOH2241

site_idBC8
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1791
ChainResidue
ASER634
BSER634

site_idBC9
Number of Residues12
DetailsBINDING SITE FOR RESIDUE Z06 B 1000
ChainResidue
AASN492
BALA459
BSER460
BTYR498
BALA499
BSER516
BASN518
BMET556
BGLY653
BTHR654
BNA1300
BHOH2261

site_idCC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 B 1100
ChainResidue
BTHR563
BLYS583
BHOH2144
BHOH2263
BHOH2264

site_idCC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 1200
ChainResidue
AARG529
BARG529

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 1201
ChainResidue
BVAL535
BLYS536
BHOH2119

site_idCC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 1203
ChainResidue
BLYS760
BSER761

site_idCC5
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 1204
ChainResidue
BASN514

site_idCC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 1206
ChainResidue
BALA592
BASP593

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 1207
ChainResidue
BASP776
BALA777
BHOH2257

site_idCC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 1208
ChainResidue
BGLU727

site_idCC9
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL B 1209
ChainResidue
BLYS725

site_idDC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1211
ChainResidue
BHOH2263
BTYR544
BGLU545
BHOH2130

site_idDC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL B 1214
ChainResidue
BSER609
BLYS610

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1216
ChainResidue
BTYR110
BSER111
BASP112
BGLN396

site_idDC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1224
ChainResidue
BPHE341
BTHR342
BASN449
BHOH2063

site_idDC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 1300
ChainResidue
BTHR652
BTHR654
BZ061000
BHOH2098

site_idDC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA B 1301
ChainResidue
BASP414
BASP593
BARG595

238895

PDB entries from 2025-07-16

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