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2XY8

Paramagnetic-based NMR structure of the complex between the N- terminal epsilon domain and the theta domain of the DNA polymerase III

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0006260biological_processDNA replication
B0003677molecular_functionDNA binding
B0003887molecular_functionDNA-directed DNA polymerase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006260biological_processDNA replication
B0006261biological_processDNA-templated DNA replication
B0006272biological_processleading strand elongation
B0006273biological_processlagging strand elongation
B0009360cellular_componentDNA polymerase III complex
B0030894cellular_componentreplisome
B0044776cellular_componentDNA polymerase III, core complex
B0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CA A 190
ChainResidue
AASP12
AGLU14
AASP167

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor
ChainResidueDetails
AHIS162

site_idSWS_FT_FI2
Number of Residues5
DetailsBINDING:
ChainResidueDetails
AASP12
AGLU14
AGLU61
AHIS66
AASP167

Catalytic Information from CSA
site_idMCSA1
Number of Residues5
DetailsM-CSA 754
ChainResidueDetails
AASP12metal ligand
AGLU14hydrogen bond acceptor, metal ligand, proton acceptor, proton donor
AGLU61electrostatic stabiliser, increase basicity, polar interaction
AHIS162proton acceptor, proton donor
AASP167metal ligand

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PDB entries from 2024-10-30

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