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2XO6

DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004519molecular_functionendonuclease activity
A0004803molecular_functiontransposase activity
A0006310biological_processDNA recombination
A0006313biological_processDNA transposition
A0032196biological_processtransposition
A0046872molecular_functionmetal ion binding
D0003677molecular_functionDNA binding
D0004519molecular_functionendonuclease activity
D0004803molecular_functiontransposase activity
D0006310biological_processDNA recombination
D0006313biological_processDNA transposition
D0032196biological_processtransposition
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CD A 1001
ChainResidue
AHIS67
AHIS69
CDT5
CDG6
DGLN136
DHOH2106

site_idAC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CD A 1002
ChainResidue
BHOH2069
BHOH2072
BHOH2073
BHOH2074
BHOH2075
BHOH2076
BHOH2077
APRO114
BDC31
BHOH2066

site_idAC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CD A 1004
ChainResidue
AASP41
AHOH2030
AHOH2032
AHOH2034
AHOH2035
BDC27
BHOH2054
BHOH2055
BHOH2056
BHOH2057

site_idAC4
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CD A 1006
ChainResidue
AASP66
AHOH2017

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CD A 1007
ChainResidue
APRO7
AGLU9
AGLU38
AGLU123

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CD D 1001
ChainResidue
AGLN136
DMET64
DHIS67
DHIS69
FDT5
FDG6
FHOH2010

site_idAC7
Number of Residues10
DetailsBINDING SITE FOR RESIDUE CD D 1002
ChainResidue
DPRO114
EDC31
EHOH2056
EHOH2057
EHOH2060
EHOH2061
EHOH2062
EHOH2063
EHOH2065
EHOH2066

site_idAC8
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CD D 1004
ChainResidue
AHIS137
DASP45
DASP49
DHOH2038
DHOH2039
DHOH2045
DHOH2046

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CD E 1002
ChainResidue
DASP41
DHOH2028
DHOH2029
DHOH2032
DHOH2033
EDT26
EHOH2041
EHOH2042

site_idBC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE MG A 1141
ChainResidue
APRO114
BDC31
BHOH2066
BHOH2069
BHOH2072
BHOH2073
BHOH2074
BHOH2075
BHOH2076
BHOH2077

site_idBC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE MG A 1142
ChainResidue
AASP41
AHOH2030
AHOH2032
AHOH2034
AHOH2035
BDC27
BHOH2054
BHOH2055
BHOH2056
BHOH2057

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MG A 1143
ChainResidue
APRO7
AGLU9
AGLU38
AGLU123

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 1001
ChainResidue
BHOH2006
BHOH2009
BHOH2026
BHOH2081
BHOH2082
BHOH2083

site_idBC5
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MG D 1137
ChainResidue
DHOH2045
DHOH2046
AHIS137
DASP45
DASP49
DHOH2038
DHOH2039

site_idBC6
Number of Residues1
DetailsBINDING SITE FOR RESIDUE ACT D 1138
ChainResidue
DTRP107

site_idBC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 1001
ChainResidue
EHOH2003
EHOH2022
EHOH2072
EHOH2074
EHOH2075
EHOH2078

site_idBC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE MG E 1038
ChainResidue
DPRO114
EDC31
EHOH2056
EHOH2057
EHOH2060
EHOH2061
EHOH2062
EHOH2063
EHOH2065
EHOH2066

site_idBC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE MG E 1039
ChainResidue
DASP41
DHOH2028
DHOH2029
DHOH2032
DHOH2033
EDT26
EHOH2041
EHOH2042

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:20890269
ChainResidueDetails
APHE132
DPHE132

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305|PubMed:20890269
ChainResidueDetails
AHIS67
AHIS69
AGLN136
DHIS67
DHIS69
DGLN136

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Critical for recognizing and stabilizing G:T mismatch in DNA substrate => ECO:0000269|PubMed:20890269
ChainResidueDetails
AARG14
DARG14

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PDB entries from 2024-07-31

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