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2XM3

Deinococcus radiodurans ISDra2 Transposase Left end DNA complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004519molecular_functionendonuclease activity
A0004803molecular_functiontransposase activity
A0006310biological_processDNA recombination
A0006313biological_processDNA transposition
A0032196biological_processtransposition
A0046872molecular_functionmetal ion binding
B0003677molecular_functionDNA binding
B0004519molecular_functionendonuclease activity
B0004803molecular_functiontransposase activity
B0006310biological_processDNA recombination
B0006313biological_processDNA transposition
B0032196biological_processtransposition
B0046872molecular_functionmetal ion binding
C0003677molecular_functionDNA binding
C0004519molecular_functionendonuclease activity
C0004803molecular_functiontransposase activity
C0006310biological_processDNA recombination
C0006313biological_processDNA transposition
C0032196biological_processtransposition
C0046872molecular_functionmetal ion binding
D0003677molecular_functionDNA binding
D0004519molecular_functionendonuclease activity
D0004803molecular_functiontransposase activity
D0006310biological_processDNA recombination
D0006313biological_processDNA transposition
D0032196biological_processtransposition
D0046872molecular_functionmetal ion binding
E0003677molecular_functionDNA binding
E0004519molecular_functionendonuclease activity
E0004803molecular_functiontransposase activity
E0006310biological_processDNA recombination
E0006313biological_processDNA transposition
E0032196biological_processtransposition
E0046872molecular_functionmetal ion binding
F0003677molecular_functionDNA binding
F0004519molecular_functionendonuclease activity
F0004803molecular_functiontransposase activity
F0006310biological_processDNA recombination
F0006313biological_processDNA transposition
F0032196biological_processtransposition
F0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE ACT B 1135
ChainResidue
BGLU62
BVAL63

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG E 1135
ChainResidue
EPRO114
EHOH2034
ODC31
OHOH2017
OHOH2019
OHOH2020

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG F 1135
ChainResidue
FHOH2023
QDC31
QHOH2018
QHOH2019
QHOH2020
FPRO114

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL G 1038
ChainResidue
ACYS27
ACYS117
AHOH2013
GDC15
GDA16
GHOH2035
HDT5

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG G 1039
ChainResidue
APRO114
BHOH2003
GDC31
GHOH2024
GHOH2026
GHOH2028

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG G 1114
ChainResidue
GHOH2012
GHOH2013
GHOH2030
GHOH2032
GHOH2033
GHOH2034

site_idAC7
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG I 1038
ChainResidue
BPRO114
BHOH2045
IDC31
IHOH2026
IHOH2029
IHOH2031

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG I 1116
ChainResidue
IHOH2010
IHOH2013
IHOH2035
IHOH2037
IHOH2038
IHOH2040

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL J 1006
ChainResidue
BCYS27
BCYS117
IDC15
IDA16
JDT5
JHOH2007
JHOH2008

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG K 1038
ChainResidue
CPRO114
CHOH2049
KDC31
KHOH2030
KHOH2033
KHOH2035

site_idBC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG K 1039
ChainResidue
KHOH2003
KHOH2004
KHOH2039
KHOH2040
KHOH2043
KHOH2045

site_idBC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL L 1006
ChainResidue
CCYS27
CCYS117
CHOH2005
KDC15
KDA16
LDT5
LHOH2004

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG M 1038
ChainResidue
DPRO114
DHOH2040
MDC31
MHOH2018
MHOH2019
MHOH2023

site_idBC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG M 1121
ChainResidue
MHOH2008
MHOH2010
MHOH2026
MHOH2027
MHOH2028
MHOH2029

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG O 1112
ChainResidue
OHOH2003
OHOH2009
OHOH2010
OHOH2021
OHOH2022
OHOH2023

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL P 1007
ChainResidue
ECYS27
ECYS117
EHOH2011
FTYR132
ODC15
ODA16
PDT5

site_idBC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG Q 1111
ChainResidue
QHOH2021
QHOH2023
QHOH2024
QHOH2003
QHOH2004
QHOH2015

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: Nucleophile => ECO:0000305|PubMed:20890269
ChainResidueDetails
ATYR132
BTYR132
CTYR132
DTYR132
ETYR132
FTYR132

site_idSWS_FT_FI2
Number of Residues18
DetailsBINDING: BINDING => ECO:0000305|PubMed:20890269
ChainResidueDetails
AHIS67
AHIS69
AGLN136
BHIS67
BHIS69
BGLN136
CHIS67
CHIS69
CGLN136
DHIS67
DHIS69
DGLN136
EHIS67
EHIS69
EGLN136
FHIS67
FHIS69
FGLN136

site_idSWS_FT_FI3
Number of Residues6
DetailsSITE: Critical for recognizing and stabilizing G:T mismatch in DNA substrate => ECO:0000269|PubMed:20890269
ChainResidueDetails
AARG14
BARG14
CARG14
DARG14
EARG14
FARG14

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PDB entries from 2024-05-29

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