2XJM
Crystal structure of Streptococcus suis Dpr with cobalt
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006879 | biological_process | intracellular iron ion homeostasis |
| A | 0008199 | molecular_function | ferric iron binding |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006879 | biological_process | intracellular iron ion homeostasis |
| B | 0008199 | molecular_function | ferric iron binding |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006879 | biological_process | intracellular iron ion homeostasis |
| C | 0008199 | molecular_function | ferric iron binding |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006879 | biological_process | intracellular iron ion homeostasis |
| D | 0008199 | molecular_function | ferric iron binding |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0006879 | biological_process | intracellular iron ion homeostasis |
| E | 0008199 | molecular_function | ferric iron binding |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0006879 | biological_process | intracellular iron ion homeostasis |
| F | 0008199 | molecular_function | ferric iron binding |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0005737 | cellular_component | cytoplasm |
| G | 0006879 | biological_process | intracellular iron ion homeostasis |
| G | 0008199 | molecular_function | ferric iron binding |
| G | 0016491 | molecular_function | oxidoreductase activity |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0005737 | cellular_component | cytoplasm |
| H | 0006879 | biological_process | intracellular iron ion homeostasis |
| H | 0008199 | molecular_function | ferric iron binding |
| H | 0016491 | molecular_function | oxidoreductase activity |
| H | 0046872 | molecular_function | metal ion binding |
| I | 0005737 | cellular_component | cytoplasm |
| I | 0006879 | biological_process | intracellular iron ion homeostasis |
| I | 0008199 | molecular_function | ferric iron binding |
| I | 0016491 | molecular_function | oxidoreductase activity |
| I | 0046872 | molecular_function | metal ion binding |
| J | 0005737 | cellular_component | cytoplasm |
| J | 0006879 | biological_process | intracellular iron ion homeostasis |
| J | 0008199 | molecular_function | ferric iron binding |
| J | 0016491 | molecular_function | oxidoreductase activity |
| J | 0046872 | molecular_function | metal ion binding |
| K | 0005737 | cellular_component | cytoplasm |
| K | 0006879 | biological_process | intracellular iron ion homeostasis |
| K | 0008199 | molecular_function | ferric iron binding |
| K | 0016491 | molecular_function | oxidoreductase activity |
| K | 0046872 | molecular_function | metal ion binding |
| L | 0005737 | cellular_component | cytoplasm |
| L | 0006879 | biological_process | intracellular iron ion homeostasis |
| L | 0008199 | molecular_function | ferric iron binding |
| L | 0016491 | molecular_function | oxidoreductase activity |
| L | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO A 1173 |
| Chain | Residue |
| A | ASP74 |
| A | GLU78 |
| A | HOH2063 |
| C | HIS47 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CL A 1174 |
| Chain | Residue |
| A | ALA169 |
| A | PRO170 |
| A | LYS171 |
| I | GLY84 |
| K | HOH2008 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CO B 1173 |
| Chain | Residue |
| B | ASP74 |
| B | GLU78 |
| B | HOH2093 |
| D | HIS47 |
| D | HOH2022 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CA B 1174 |
| Chain | Residue |
| B | GLU113 |
| B | HOH2058 |
| K | HOH2054 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO C 1173 |
| Chain | Residue |
| A | HIS47 |
| A | HOH2014 |
| C | ASP74 |
| C | GLU78 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CA C 1174 |
| Chain | Residue |
| L | HOH2049 |
| L | HOH2050 |
| L | HOH2051 |
| site_id | AC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CO D 1173 |
| Chain | Residue |
| B | HIS47 |
| D | ASP74 |
| D | GLU78 |
| D | HOH2088 |
| D | HOH2089 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE EPE E 1173 |
| Chain | Residue |
| C | ARG53 |
| C | GLY54 |
| C | ILE57 |
| E | GLY54 |
| E | ASP137 |
| E | HOH2038 |
| E | HOH2043 |
| L | GLY54 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO E 1174 |
| Chain | Residue |
| E | ASP74 |
| E | GLU78 |
| E | HOH2022 |
| G | HIS47 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CA E 1175 |
| Chain | Residue |
| C | LEU166 |
| E | ALA23 |
| E | GLU139 |
| site_id | BC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CO F 1173 |
| Chain | Residue |
| F | ASP74 |
| F | GLU78 |
| H | HIS47 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE CA F 1174 |
| Chain | Residue |
| F | LEU166 |
| F | HOH2064 |
| F | HOH2065 |
| K | ASP24 |
| K | GLU139 |
| K | HOH2058 |
| site_id | BC4 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CA F 1175 |
| Chain | Residue |
| F | HOH2037 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CO G 1173 |
| Chain | Residue |
| E | HIS47 |
| G | ASP74 |
| G | GLU78 |
| G | HOH2022 |
| G | HOH2052 |
| site_id | BC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO H 1173 |
| Chain | Residue |
| F | HIS47 |
| F | HOH2017 |
| H | ASP74 |
| H | GLU78 |
| site_id | BC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE CA H 1176 |
| Chain | Residue |
| G | ASN108 |
| K | HOH2070 |
| site_id | BC8 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE EPE I 1173 |
| Chain | Residue |
| D | HOH2082 |
| G | ARG53 |
| G | GLY54 |
| G | HOH2045 |
| I | GLY54 |
| I | HOH2064 |
| site_id | BC9 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO I 1174 |
| Chain | Residue |
| I | ASP74 |
| I | GLU78 |
| I | HOH2027 |
| K | HIS47 |
| site_id | CC1 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL I 1175 |
| Chain | Residue |
| I | ALA169 |
| site_id | CC2 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CA I 1176 |
| Chain | Residue |
| A | ASN108 |
| I | HOH2042 |
| I | HOH2043 |
| site_id | CC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE EPE J 1173 |
| Chain | Residue |
| B | GLY54 |
| B | HOH2085 |
| F | GLY54 |
| F | HOH2063 |
| J | GLY54 |
| J | HOH2067 |
| J | HOH2072 |
| J | HOH2073 |
| K | ASP137 |
| site_id | CC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CO J 1174 |
| Chain | Residue |
| J | ASP74 |
| J | GLU78 |
| J | HOH2035 |
| L | HIS47 |
| site_id | CC5 |
| Number of Residues | 1 |
| Details | BINDING SITE FOR RESIDUE CL J 1175 |
| Chain | Residue |
| J | HOH2021 |
| site_id | CC6 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE CA J 1176 |
| Chain | Residue |
| B | HOH2087 |
| J | HOH2019 |
| J | HOH2047 |
| J | HOH2048 |
| site_id | CC7 |
| Number of Residues | 7 |
| Details | BINDING SITE FOR RESIDUE EPE K 1173 |
| Chain | Residue |
| H | ARG53 |
| H | GLY54 |
| H | HOH2050 |
| K | ARG53 |
| K | GLY54 |
| A | GLY54 |
| G | GLU112 |
| site_id | CC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE CO K 1174 |
| Chain | Residue |
| I | HIS47 |
| K | ASP74 |
| K | GLU78 |
| site_id | CC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE CO L 1173 |
| Chain | Residue |
| J | HIS47 |
| L | ASP74 |
| L | GLU78 |
| L | HOH2030 |
| L | HOH2070 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 24 |
| Details | BINDING: BINDING => ECO:0000250 |
| Chain | Residue | Details |
| A | HIS47 | |
| E | GLU78 | |
| F | HIS47 | |
| F | GLU78 | |
| G | HIS47 | |
| G | GLU78 | |
| H | HIS47 | |
| H | GLU78 | |
| I | HIS47 | |
| I | GLU78 | |
| J | HIS47 | |
| A | GLU78 | |
| J | GLU78 | |
| K | HIS47 | |
| K | GLU78 | |
| L | HIS47 | |
| L | GLU78 | |
| B | HIS47 | |
| B | GLU78 | |
| C | HIS47 | |
| C | GLU78 | |
| D | HIS47 | |
| D | GLU78 | |
| E | HIS47 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 12 |
| Details | BINDING: in other chain => ECO:0000250 |
| Chain | Residue | Details |
| A | ASP74 | |
| J | ASP74 | |
| K | ASP74 | |
| L | ASP74 | |
| B | ASP74 | |
| C | ASP74 | |
| D | ASP74 | |
| E | ASP74 | |
| F | ASP74 | |
| G | ASP74 | |
| H | ASP74 | |
| I | ASP74 |
