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2WYB

The quorum quenching N-acyl homoserine lactone acylase PvdQ with a covalently bound dodecanoic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0016787molecular_functionhydrolase activity
A0016811molecular_functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
A0017000biological_processantibiotic biosynthetic process
B0016787molecular_functionhydrolase activity
B0017000biological_processantibiotic biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues8
DetailsBINDING SITE FOR RESIDUE DAO B 1547
ChainResidue
BSER1
BPHE24
BTHR69
BVAL70
BVAL158
BTRP162
BASN269
BHOH2222

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 1170
ChainResidue
AASP26
AGLU70
ALEU71
AASP72
AASP157
ALYS25

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL B 1548
ChainResidue
BTHR156
BARG157
BALA246
BHOH2085
BHOH2088
BHOH2223

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 1549
ChainResidue
BGLN357
BTRP358
BASP359
BASP365
BGLY367

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE GOL A 1171
ChainResidue
AGLU149
AGLY150
AGLN154
BMET30
BVAL70
BTRP186

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL B 1550
ChainResidue
BPRO40
BGLY41
BVAL119
BHIS121

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL B 1551
ChainResidue
BLEU364
BASP365
BARG435
BGLY437
BASP438

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000250
ChainResidueDetails
BSER1

219869

PDB entries from 2024-05-15

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