2WVV
Crystal structure of an alpha-L-fucosidase GH29 from Bacteroides thetaiotaomicron
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004560 | molecular_function | alpha-L-fucosidase activity |
| A | 0005764 | cellular_component | lysosome |
| A | 0005975 | biological_process | carbohydrate metabolic process |
| A | 0006004 | biological_process | fucose metabolic process |
| A | 0015928 | molecular_function | fucosidase activity |
| A | 0016139 | biological_process | glycoside catabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| B | 0004560 | molecular_function | alpha-L-fucosidase activity |
| B | 0005764 | cellular_component | lysosome |
| B | 0005975 | biological_process | carbohydrate metabolic process |
| B | 0006004 | biological_process | fucose metabolic process |
| B | 0015928 | molecular_function | fucosidase activity |
| B | 0016139 | biological_process | glycoside catabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| C | 0004560 | molecular_function | alpha-L-fucosidase activity |
| C | 0005764 | cellular_component | lysosome |
| C | 0005975 | biological_process | carbohydrate metabolic process |
| C | 0006004 | biological_process | fucose metabolic process |
| C | 0015928 | molecular_function | fucosidase activity |
| C | 0016139 | biological_process | glycoside catabolic process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| D | 0004560 | molecular_function | alpha-L-fucosidase activity |
| D | 0005764 | cellular_component | lysosome |
| D | 0005975 | biological_process | carbohydrate metabolic process |
| D | 0006004 | biological_process | fucose metabolic process |
| D | 0015928 | molecular_function | fucosidase activity |
| D | 0016139 | biological_process | glycoside catabolic process |
| D | 0016787 | molecular_function | hydrolase activity |
| D | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | BINDING SITE FOR RESIDUE TRS B 1709 |
| Chain | Residue |
| B | HIS66 |
| B | HOH2342 |
| B | HOH2343 |
| B | HOH2344 |
| B | HOH2345 |
| B | GLU87 |
| B | TRP88 |
| B | HIS135 |
| B | HIS136 |
| B | TYR178 |
| B | ASP229 |
| B | TRP232 |
| B | TRP316 |
| site_id | AC2 |
| Number of Residues | 12 |
| Details | BINDING SITE FOR RESIDUE TRS C 1709 |
| Chain | Residue |
| C | HIS66 |
| C | GLU87 |
| C | TRP88 |
| C | HIS135 |
| C | HIS136 |
| C | TYR178 |
| C | ASP229 |
| C | TRP232 |
| C | TRP316 |
| C | HOH2161 |
| C | HOH2280 |
| C | HOH2282 |
| site_id | AC3 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE TRS A 1473 |
| Chain | Residue |
| A | HIS66 |
| A | GLU87 |
| A | TRP88 |
| A | HIS135 |
| A | HIS136 |
| A | ASP229 |
| A | GLU288 |
| A | TRP316 |
| A | HOH2276 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | BINDING SITE FOR RESIDUE TRS D 1472 |
| Chain | Residue |
| D | HIS66 |
| D | GLU87 |
| D | TRP88 |
| D | HIS135 |
| D | TYR178 |
| D | ASP229 |
| D | GLU288 |
| D | TRP316 |
| D | HOH2184 |
| site_id | AC5 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL B 1710 |
| Chain | Residue |
| B | TRP88 |
| B | ASP481 |
| B | LEU483 |
| B | HOH2052 |
| B | HOH2344 |
| B | HOH2345 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 1710 |
| Chain | Residue |
| B | GLY437 |
| C | PRO73 |
| C | GLU76 |
| C | TRP77 |
| C | ASN78 |
| C | HOH2032 |
| site_id | AC7 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE GOL B 1711 |
| Chain | Residue |
| B | GLY277 |
| B | TRP303 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE GOL A 1476 |
| Chain | Residue |
| B | ALA471 |
| B | ALA472 |
| B | LYS473 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1712 |
| Chain | Residue |
| B | LYS90 |
| B | ALA97 |
| site_id | BC1 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 D 1473 |
| Chain | Residue |
| D | ARG262 |
| D | ARG271 |
| D | HIS272 |
| site_id | BC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1474 |
| Chain | Residue |
| A | TRP232 |
| A | ARG262 |
| A | ARG271 |
| A | HIS272 |
| site_id | BC3 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1475 |
| Chain | Residue |
| A | LYS80 |
| A | TYR82 |
| A | GLY83 |
| A | HOH2277 |
| A | HOH2278 |
