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2WQN

Structure of ADP-bound human Nek7

Functional Information from GO Data
ChainGOidnamespacecontents
A0000922cellular_componentspindle pole
A0004672molecular_functionprotein kinase activity
A0004674molecular_functionprotein serine/threonine kinase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005813cellular_componentcentrosome
A0005815cellular_componentmicrotubule organizing center
A0005856cellular_componentcytoskeleton
A0005874cellular_componentmicrotubule
A0006338biological_processchromatin remodeling
A0006468biological_processprotein phosphorylation
A0007346biological_processregulation of mitotic cell cycle
A0016310biological_processphosphorylation
A0032206biological_processpositive regulation of telomere maintenance
A0035865biological_processcellular response to potassium ion
A0044024molecular_functionhistone H2AS1 kinase activity
A0046872molecular_functionmetal ion binding
A0051225biological_processspindle assembly
A0106310molecular_functionprotein serine kinase activity
A0140677molecular_functionmolecular function activator activity
A1900227biological_processpositive regulation of NLRP3 inflammasome complex assembly
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE ADP A 1301
ChainResidue
AGLY43
AASP179
AMG1303
AGLN44
APHE45
ASER46
AVAL48
AALA61
ALYS63
AGLU112
AALA114

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NI A 1302
ChainResidue
AHIS209
AHIS209
ACYS247
ACYS247

site_idAC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG A 1303
ChainResidue
AGLN44
AADP1301

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1304
ChainResidue
AARG23
AARG136
ATHR137
ALYS140

Functional Information from PROSITE/UniProt
site_idPS00107
Number of Residues24
DetailsPROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. IGRGQFSEVYrAaclldgvp..........VALK
ChainResidueDetails
AILE40-LYS63

site_idPS00108
Number of Residues13
DetailsPROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VmHrDIKpaNVFI
ChainResidueDetails
AVAL157-ILE169

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000255|PROSITE-ProRule:PRU10027
ChainResidueDetails
AASP161

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000305|PubMed:19941817, ECO:0007744|PDB:2WQN
ChainResidueDetails
AILE40
ALYS63

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Autoinhibitory => ECO:0000269|PubMed:19941817
ChainResidueDetails
ATYR97

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330
ChainResidueDetails
AMET1

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER5

site_idSWS_FT_FI6
Number of Residues1
DetailsMOD_RES: Phosphoserine; by NEK9 => ECO:0000269|PubMed:12840024, ECO:0000269|PubMed:26522158
ChainResidueDetails
ASER195

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP161
AALA165

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASP161
ALYS163

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
ATHR199
AASP161
ALYS163

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1ir3
ChainResidueDetails
AASN166
AASP161
ALYS163

226707

PDB entries from 2024-10-30

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