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2WP8

yeast rrp44 nuclease

Functional Information from GO Data
ChainGOidnamespacecontents
A0000176cellular_componentnuclear exosome (RNase complex)
A0000177cellular_componentcytoplasmic exosome (RNase complex)
A0000178cellular_componentexosome (RNase complex)
A0000288biological_processnuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
A0000467biological_processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0000956biological_processnuclear-transcribed mRNA catabolic process
A0003674molecular_functionmolecular_function
A0003723molecular_functionRNA binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005730cellular_componentnucleolus
A0005737cellular_componentcytoplasm
A0006364biological_processrRNA processing
A0006396biological_processRNA processing
A0006401biological_processRNA catabolic process
A0034473biological_processU1 snRNA 3'-end processing
A0034475biological_processU4 snRNA 3'-end processing
A0034476biological_processU5 snRNA 3'-end processing
A0035925molecular_functionmRNA 3'-UTR AU-rich region binding
A0071028biological_processnuclear mRNA surveillance
A0071035biological_processnuclear polyadenylation-dependent rRNA catabolic process
A0071038biological_processTRAMP-dependent tRNA surveillance pathway
B0000176cellular_componentnuclear exosome (RNase complex)
B0000177cellular_componentcytoplasmic exosome (RNase complex)
B0000178cellular_componentexosome (RNase complex)
B0000467biological_processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
B0000956biological_processnuclear-transcribed mRNA catabolic process
B0003674molecular_functionmolecular_function
B0003723molecular_functionRNA binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005730cellular_componentnucleolus
B0005737cellular_componentcytoplasm
B0006364biological_processrRNA processing
B0006396biological_processRNA processing
B0006401biological_processRNA catabolic process
B0016075biological_processrRNA catabolic process
B0034473biological_processU1 snRNA 3'-end processing
B0034475biological_processU4 snRNA 3'-end processing
B0034476biological_processU5 snRNA 3'-end processing
B0070478biological_processnuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
B0071028biological_processnuclear mRNA surveillance
B0071038biological_processTRAMP-dependent tRNA surveillance pathway
B0071039biological_processnuclear polyadenylation-dependent CUT catabolic process
B0071051biological_processpoly(A)-dependent snoRNA 3'-end processing
J0000049molecular_functiontRNA binding
J0000175molecular_function3'-5'-RNA exonuclease activity
J0000176cellular_componentnuclear exosome (RNase complex)
J0000177cellular_componentcytoplasmic exosome (RNase complex)
J0000178cellular_componentexosome (RNase complex)
J0000467biological_processexonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J0003676molecular_functionnucleic acid binding
J0003723molecular_functionRNA binding
J0004519molecular_functionendonuclease activity
J0004521molecular_functionRNA endonuclease activity
J0004527molecular_functionexonuclease activity
J0004540molecular_functionRNA nuclease activity
J0005515molecular_functionprotein binding
J0005634cellular_componentnucleus
J0005730cellular_componentnucleolus
J0005737cellular_componentcytoplasm
J0005739cellular_componentmitochondrion
J0006364biological_processrRNA processing
J0006396biological_processRNA processing
J0006397biological_processmRNA processing
J0006401biological_processRNA catabolic process
J0016075biological_processrRNA catabolic process
J0043628biological_processregulatory ncRNA 3'-end processing
J0070651biological_processnonfunctional rRNA decay
J0071028biological_processnuclear mRNA surveillance
J0071031biological_processnuclear mRNA surveillance of mRNA 3'-end processing
J0071035biological_processnuclear polyadenylation-dependent rRNA catabolic process
J0071038biological_processTRAMP-dependent tRNA surveillance pathway
J0071039biological_processnuclear polyadenylation-dependent CUT catabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 1240
ChainResidue
BHIS32
BPRO33
BHIS34
BALA35

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE GOL J 2002
ChainResidue
JILE280
JPHE285
JALA310
JCYS430

Functional Information from PROSITE/UniProt
site_idPS01175
Number of Residues25
DetailsRIBONUCLEASE_II Ribonuclease II family signature. HYGLavdi.YThFTSPIRRYcDvvaH
ChainResidueDetails
JHIS831-HIS855

222624

PDB entries from 2024-07-17

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