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2WKH

Crystal structure of the acyl-enzyme OXA-10 K70C-Ampicillin at pH 7

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0008658molecular_functionpenicillin binding
A0008800molecular_functionbeta-lactamase activity
A0016787molecular_functionhydrolase activity
A0042597cellular_componentperiplasmic space
A0046677biological_processresponse to antibiotic
A0071555biological_processcell wall organization
B0005886cellular_componentplasma membrane
B0008658molecular_functionpenicillin binding
B0008800molecular_functionbeta-lactamase activity
B0016787molecular_functionhydrolase activity
B0042597cellular_componentperiplasmic space
B0046677biological_processresponse to antibiotic
B0071555biological_processcell wall organization
Functional Information from PDB Data
site_idAC1
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ZZ7 A 1265
ChainResidue
AALA66
AGLY207
APHE208
ASER209
ALEU247
AARG250
AHOH2125
AHOH2136
AHOH2148
ASER67
AMET99
ATRP102
ASER115
AVAL117
AGLU129
ALEU155
ATHR206

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 1266
ChainResidue
AARG160
AHOH2150
AHOH2151

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1267
ChainResidue
AMET99
ALYS100
ASER147
AGLY148
AHOH2152
AHOH2153

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 A 1268
ChainResidue
ASER67
ASER115
ALYS205
ATHR206
AGLY207
APHE208
AARG250

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE ZZ7 B 1265
ChainResidue
BALA66
BSER67
BMET99
BSER115
BVAL117
BGLY207
BPHE208
BSER209
BGLY210
BARG250

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 B 1266
ChainResidue
BTHR80
BARG131
BLYS134
BTYR135

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE SO4 B 1267
ChainResidue
BSER67
BSER115
BLYS205
BTHR206
BGLY207
BPHE208
BARG250

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsActive site: {"description":"Acyl-ester intermediate","evidences":[{"source":"PubMed","id":"11724923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19860471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1K54","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGI","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"19860471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2WGI","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PubMed","id":"11188693","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"11724923","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19860471","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1E4D","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K4E","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K4F","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K54","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K55","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K56","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K57","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1K6S","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2RL3","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

246704

PDB entries from 2025-12-24

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