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2WK6

Structural features of native human thymidine phosphorylase and in complex with 5-iodouracil

Functional Information from GO Data
ChainGOidnamespacecontents
A0001525biological_processangiogenesis
A0004645molecular_function1,4-alpha-oligoglucan phosphorylase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0006206biological_processpyrimidine nucleobase metabolic process
A0006213biological_processpyrimidine nucleoside metabolic process
A0006935biological_processchemotaxis
A0007165biological_processsignal transduction
A0008083molecular_functiongrowth factor activity
A0009032molecular_functionthymidine phosphorylase activity
A0016154molecular_functionpyrimidine-nucleoside phosphorylase activity
A0016740molecular_functiontransferase activity
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0030154biological_processcell differentiation
A0042803molecular_functionprotein homodimerization activity
A0046074biological_processdTMP catabolic process
A0055086biological_processnucleobase-containing small molecule metabolic process
A0072527biological_processpyrimidine-containing compound metabolic process
A1901135biological_processcarbohydrate derivative metabolic process
B0001525biological_processangiogenesis
B0004645molecular_function1,4-alpha-oligoglucan phosphorylase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0006206biological_processpyrimidine nucleobase metabolic process
B0006213biological_processpyrimidine nucleoside metabolic process
B0006935biological_processchemotaxis
B0007165biological_processsignal transduction
B0008083molecular_functiongrowth factor activity
B0009032molecular_functionthymidine phosphorylase activity
B0016154molecular_functionpyrimidine-nucleoside phosphorylase activity
B0016740molecular_functiontransferase activity
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0030154biological_processcell differentiation
B0042803molecular_functionprotein homodimerization activity
B0046074biological_processdTMP catabolic process
B0055086biological_processnucleobase-containing small molecule metabolic process
B0072527biological_processpyrimidine-containing compound metabolic process
B1901135biological_processcarbohydrate derivative metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues10
DetailsBINDING SITE FOR RESIDUE IUR A 1482
ChainResidue
AHIS116
AVAL241
ATHR118
ALEU148
ATYR199
AARG202
AILE214
ASER217
AILE218
ALYS221

site_idAC2
Number of Residues11
DetailsBINDING SITE FOR RESIDUE IUR B 1482
ChainResidue
BHIS116
BSER117
BTHR118
BLEU148
BTYR199
BARG202
BILE214
BSER217
BILE218
BLYS221
BVAL241

Functional Information from PROSITE/UniProt
site_idPS00647
Number of Residues16
DetailsTHYMID_PHOSPHORYLASE Thymidine and pyrimidine-nucleoside phosphorylases signature. SGRGLghTGGTlDkLE
ChainResidueDetails
ASER144-GLU159

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues54
DetailsRepeat: {"description":"R-V-A-A-A-L-X(5,6)-L-G-R"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues32
DetailsRepeat: {"description":"R-A-L-X-X-A-L-V-L"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsBinding site: {}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1azy
ChainResidueDetails
ALYS221
AHIS116
AARG202

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1azy
ChainResidueDetails
BLYS221
BHIS116
BARG202

site_idCSA3
Number of Residues4
DetailsAnnotated By Reference To The Literature 1azy
ChainResidueDetails
ALYS221
AHIS116
ASER217
AARG202

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1azy
ChainResidueDetails
BLYS221
BHIS116
BSER217
BARG202

246031

PDB entries from 2025-12-10

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