2WEF
Human 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1) in complex with AMP, PO4 and Magnesium
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004441 | molecular_function | inositol-1,4-bisphosphate 1-phosphatase activity |
A | 0005739 | cellular_component | mitochondrion |
A | 0005829 | cellular_component | cytosol |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0007399 | biological_process | nervous system development |
A | 0008441 | molecular_function | 3'(2'),5'-bisphosphate nucleotidase activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0046854 | biological_process | phosphatidylinositol phosphate biosynthetic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0050427 | biological_process | 3'-phosphoadenosine 5'-phosphosulfate metabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 7 |
Details | BINDING SITE FOR RESIDUE MG A 401 |
Chain | Residue |
A | ASP117 |
A | ASP120 |
A | ASP247 |
A | MG402 |
A | PO4501 |
A | AMP601 |
A | HOH2206 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 402 |
Chain | Residue |
A | LEU119 |
A | MG401 |
A | PO4501 |
A | HOH2038 |
A | GLU74 |
A | ASP117 |
site_id | AC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE MG A 403 |
Chain | Residue |
A | GLU74 |
A | PO4501 |
A | HOH2033 |
A | HOH2035 |
A | HOH2064 |
A | HOH2249 |
site_id | AC4 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PO4 A 501 |
Chain | Residue |
A | ASP51 |
A | GLU74 |
A | ASP117 |
A | LEU119 |
A | ASP120 |
A | GLY121 |
A | THR122 |
A | MG401 |
A | MG402 |
A | MG403 |
A | AMP601 |
A | HOH2035 |
A | HOH2038 |
A | HOH2064 |
A | HOH2206 |
A | HOH2248 |
A | HOH2249 |
site_id | AC5 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE AMP A 601 |
Chain | Residue |
A | ASP120 |
A | THR195 |
A | HIS198 |
A | GLY220 |
A | LYS224 |
A | PHE238 |
A | GLY242 |
A | CYS243 |
A | ASP247 |
A | MG401 |
A | PO4501 |
A | HOH2118 |
A | HOH2206 |
A | HOH2249 |
A | HOH2250 |
A | HOH2251 |
Functional Information from PROSITE/UniProt
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"Q9Z1N4","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 9 |
Details | Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"submission","publicationDate":"APR-2009","submissionDatabase":"PDB data bank","title":"Human 3'(2'), 5'-bisphosphate nucleotidase 1 (BPNT1) in complex with AMP, PO4 and magnesium.","authoringGroup":["Structural genomics consortium (SGC)"]}},{"source":"PDB","id":"2WEF","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"24275569","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 1 |
Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q9Z0S1","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 2 |
Details | Annotated By Reference To The Literature 1ima |
Chain | Residue | Details |
A | GLU74 | |
A | THR122 |
site_id | CSA2 |
Number of Residues | 3 |
Details | Annotated By Reference To The Literature 1ima |
Chain | Residue | Details |
A | ASP51 | |
A | THR122 | |
A | ASP247 |