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2WBP

Crystal structure of VioC in complex with Fe(II), (2S,3S)- hydroxyarginine, and succinate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0016020cellular_componentmembrane
A0016491molecular_functionoxidoreductase activity
A0016706molecular_function2-oxoglutarate-dependent dioxygenase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
A0102525molecular_function2-oxoglutarate, L-arginine oxygenase (succinate-forming) activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 A 1358
ChainResidue
AHIS168
AGLU170
AHIS316
AZZU1359
ASIN1360

site_idAC2
Number of Residues17
DetailsBINDING SITE FOR RESIDUE ZZU A 1359
ChainResidue
ALEU165
AHIS168
AGLU170
AASP222
ASER224
AASP268
AASP270
APHE271
AARG334
AFE21358
ASIN1360
AHOH2213
AHOH2272
AGLN137
ALEU156
AVAL157
ASER158

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE SIN A 1360
ChainResidue
AVAL146
ALEU165
AHIS168
AGLU170
ATHR194
AHIS316
AARG318
AARG330
ALEU332
AARG334
AFE21358
AZZU1359
AHOH2384

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ARG A 1361
ChainResidue
AARG47
ATYR48
AGLU55
AASP59
AARG77
AVAL238
AGLN245

site_idAC5
Number of Residues11
DetailsBINDING SITE FOR RESIDUE GOL A 1362
ChainResidue
AGLY166
ATRP167
AGLY269
AARG289
AASP293
AARG328
AHOH2214
AHOH2363
AHOH2385
AHOH2386
AHOH2387

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues18
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
ALEU117-ALA135

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING:
ChainResidueDetails
ALEU156
AHIS168
AGLU170
ATHR194
AASP268
AHIS316
AARG330
AARG334

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PDB entries from 2024-07-17

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