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2W8Z

Geobacillus stearothermophilus 6-phosphogluconate dehydrogenase with bound 6- phosphogluconate

Functional Information from GO Data
ChainGOidnamespacecontents
A0004616molecular_functionphosphogluconate dehydrogenase (decarboxylating) activity
A0006098biological_processpentose-phosphate shunt
A0016054biological_processorganic acid catabolic process
A0016491molecular_functionoxidoreductase activity
A0019521biological_processD-gluconate metabolic process
A0050661molecular_functionNADP binding
B0004616molecular_functionphosphogluconate dehydrogenase (decarboxylating) activity
B0006098biological_processpentose-phosphate shunt
B0016054biological_processorganic acid catabolic process
B0016491molecular_functionoxidoreductase activity
B0019521biological_processD-gluconate metabolic process
B0050661molecular_functionNADP binding
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE 6PG A 1470
ChainResidue
AMET14
AGLU189
ATYR190
AGLN259
ALYS260
AARG287
AHOH2067
AHOH2070
AHOH2158
AHOH2159
BARG446
AASN102
BHIS452
AVAL127
ASER128
AGLY129
AGLY130
ALYS182
AHIS185
AASN186

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A 1471
ChainResidue
ALYS256
AALA291
AMET292
ALYS293
AASP294
AHOH2160

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE TRS A 1472
ChainResidue
AARG446
AHIS452
ATHR453
AHOH2161
AHOH2162
AHOH2163
AHOH2164
AHOH2165
AHOH2166
AHOH2167
BGLY258
BGLN259
BLYS260

site_idAC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE TRS A 1474
ChainResidue
ASER345
AGLU346
AASN349
ATRP350
AASN351
AHOH2168

site_idAC5
Number of Residues24
DetailsBINDING SITE FOR RESIDUE 6PG B 1469
ChainResidue
AARG446
AHIS452
BASN102
BSER128
BGLY129
BGLY130
BLYS182
BHIS185
BASN186
BGLU189
BTYR190
BGLN259
BLYS260
BTHR262
BARG287
BILE366
BHOH2062
BHOH2172
BHOH2174
BHOH2175
BHOH2176
BHOH2177
BHOH2178
BHOH2179

Functional Information from PROSITE/UniProt
site_idPS00461
Number of Residues13
Details6PGD 6-phosphogluconate dehydrogenase signature. IlDkaGQKGTGkW
ChainResidueDetails
AILE253-TRP265

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 2pgd
ChainResidueDetails
AASN186
AGLU189
ALYS182
AGLY130

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 2pgd
ChainResidueDetails
BASN186
BGLU189
BLYS182
BGLY130

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PDB entries from 2024-07-31

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