2W8B
Crystal structure of processed TolB in complex with Pal
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005515 | molecular_function | protein binding |
| A | 0015031 | biological_process | protein transport |
| A | 0016020 | cellular_component | membrane |
| A | 0017038 | biological_process | protein import |
| A | 0019904 | molecular_function | protein domain specific binding |
| A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| A | 0032153 | cellular_component | cell division site |
| A | 0032991 | cellular_component | protein-containing complex |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0043213 | biological_process | bacteriocin transport |
| A | 0044877 | molecular_function | protein-containing complex binding |
| A | 0051301 | biological_process | cell division |
| A | 0071237 | biological_process | cellular response to bacteriocin |
| A | 0090529 | biological_process | cell septum assembly |
| A | 1905153 | biological_process | regulation of membrane invagination |
| B | 0005515 | molecular_function | protein binding |
| B | 0015031 | biological_process | protein transport |
| B | 0016020 | cellular_component | membrane |
| B | 0017038 | biological_process | protein import |
| B | 0019904 | molecular_function | protein domain specific binding |
| B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| B | 0032153 | cellular_component | cell division site |
| B | 0032991 | cellular_component | protein-containing complex |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0043213 | biological_process | bacteriocin transport |
| B | 0044877 | molecular_function | protein-containing complex binding |
| B | 0051301 | biological_process | cell division |
| B | 0071237 | biological_process | cellular response to bacteriocin |
| B | 0090529 | biological_process | cell septum assembly |
| B | 1905153 | biological_process | regulation of membrane invagination |
| C | 0009279 | cellular_component | cell outer membrane |
| C | 0016020 | cellular_component | membrane |
| D | 0005515 | molecular_function | protein binding |
| D | 0015031 | biological_process | protein transport |
| D | 0016020 | cellular_component | membrane |
| D | 0017038 | biological_process | protein import |
| D | 0019904 | molecular_function | protein domain specific binding |
| D | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| D | 0032153 | cellular_component | cell division site |
| D | 0032991 | cellular_component | protein-containing complex |
| D | 0042597 | cellular_component | periplasmic space |
| D | 0043213 | biological_process | bacteriocin transport |
| D | 0044877 | molecular_function | protein-containing complex binding |
| D | 0051301 | biological_process | cell division |
| D | 0071237 | biological_process | cellular response to bacteriocin |
| D | 0090529 | biological_process | cell septum assembly |
| D | 1905153 | biological_process | regulation of membrane invagination |
| E | 0009279 | cellular_component | cell outer membrane |
| E | 0016020 | cellular_component | membrane |
| F | 0005515 | molecular_function | protein binding |
| F | 0015031 | biological_process | protein transport |
| F | 0016020 | cellular_component | membrane |
| F | 0017038 | biological_process | protein import |
| F | 0019904 | molecular_function | protein domain specific binding |
| F | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
| F | 0032153 | cellular_component | cell division site |
| F | 0032991 | cellular_component | protein-containing complex |
| F | 0042597 | cellular_component | periplasmic space |
| F | 0043213 | biological_process | bacteriocin transport |
| F | 0044877 | molecular_function | protein-containing complex binding |
| F | 0051301 | biological_process | cell division |
| F | 0071237 | biological_process | cellular response to bacteriocin |
| F | 0090529 | biological_process | cell septum assembly |
| F | 1905153 | biological_process | regulation of membrane invagination |
| G | 0009279 | cellular_component | cell outer membrane |
| G | 0016020 | cellular_component | membrane |
| H | 0009279 | cellular_component | cell outer membrane |
| H | 0016020 | cellular_component | membrane |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1431 |
| Chain | Residue |
| A | ASN64 |
| A | SER65 |
| A | PHE163 |
| A | TYR187 |
| A | MET388 |
| A | TRP426 |
| A | HOH2351 |
| A | HOH2352 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1432 |
| Chain | Residue |
| A | HOH2354 |
| H | LYS130 |
| H | ILE145 |
| A | ARG244 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | BINDING SITE FOR RESIDUE SO4 A 1433 |
| Chain | Residue |
| A | GLY286 |
| A | ARG287 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL A 1434 |
| Chain | Residue |
| A | GLU22 |
| A | ARG24 |
| A | ASN191 |
| A | GLN192 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT A 1435 |
| Chain | Residue |
| A | ASP150 |
| A | GLY161 |
| A | ALA162 |
| A | PHE163 |
| A | ARG164 |
| A | THR165 |
| A | TYR429 |
| A | LEU430 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1431 |
| Chain | Residue |
| B | ALA89 |
| B | GLY286 |
| B | ARG287 |
| site_id | AC7 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE SO4 B 1432 |
| Chain | Residue |
| B | LYS213 |
| B | ARG237 |
| B | HOH2311 |
| B | HOH2312 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE GOL B 1433 |
| Chain | Residue |
| B | SER65 |
| B | PHE163 |
| B | TYR187 |
| B | ASN385 |
| B | THR387 |
| B | HOH2027 |
| B | HOH2313 |
| B | HOH2314 |
| site_id | AC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL B 1434 |
| Chain | Residue |
| B | GLU22 |
| B | ARG24 |
| B | TYR190 |
| B | ASN191 |
| B | GLN192 |
| site_id | BC1 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT B 1435 |
| Chain | Residue |
| B | ASP150 |
| B | GLY161 |
| B | ALA162 |
| B | PHE163 |
| B | ARG164 |
| B | THR165 |
| B | TYR429 |
| B | LEU430 |
| site_id | BC2 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE GOL C 1174 |
| Chain | Residue |
| B | ARG244 |
| C | LYS130 |
| C | ILE143 |
| C | SER144 |
| C | ILE145 |
| C | HOH2035 |
| site_id | BC3 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE SO4 D 1431 |
| Chain | Residue |
| D | SER29 |
| D | GLY30 |
| D | VAL31 |
| D | ASP32 |
| D | HOH2315 |
| D | HOH2316 |
| site_id | BC4 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL D 1432 |
| Chain | Residue |
| D | GLU22 |
| D | ARG24 |
| D | GLY189 |
| D | ASN191 |
| D | GLN192 |
| site_id | BC5 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE GOL D 1433 |
| Chain | Residue |
| D | ALA89 |
| D | ASP285 |
| D | GLY286 |
| D | ARG287 |
| D | GLN308 |
| site_id | BC6 |
| Number of Residues | 8 |
| Details | BINDING SITE FOR RESIDUE ACT D 1434 |
| Chain | Residue |
| D | ASP150 |
| D | GLY161 |
| D | ALA162 |
| D | PHE163 |
| D | ARG164 |
| D | THR165 |
| D | TYR429 |
| D | LEU430 |
| site_id | BC7 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 F 1431 |
| Chain | Residue |
| F | GLY56 |
| F | ILE57 |
| F | ARG142 |
| F | TYR190 |
| F | HOH2134 |
| site_id | BC8 |
| Number of Residues | 4 |
| Details | BINDING SITE FOR RESIDUE GOL F 1432 |
| Chain | Residue |
| F | GLU22 |
| F | ARG24 |
| F | ASN191 |
| F | GLN192 |
| site_id | BC9 |
| Number of Residues | 5 |
| Details | BINDING SITE FOR RESIDUE SO4 G 1175 |
| Chain | Residue |
| D | LYS213 |
| D | ARG237 |
| G | LYS165 |
| G | HOH2059 |
| G | HOH2060 |
| site_id | CC1 |
| Number of Residues | 6 |
| Details | BINDING SITE FOR RESIDUE ACT H 1175 |
| Chain | Residue |
| H | ALA109 |
| H | ASP110 |
| H | LEU121 |
| H | ARG125 |
| H | ARG167 |
| H | ASP76 |
Functional Information from PROSITE/UniProt
| site_id | PS01068 |
| Number of Residues | 45 |
| Details | OMPA_1 OmpA-like domain. VeGhADer.GTpeYNisLGERRAnaVkmyLqgkg.VsadqIsivSyG |
| Chain | Residue | Details |
| C | VAL105-GLY149 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 48 |
| Details | Region: {"description":"TolA box","evidences":[{"source":"PubMed","id":"19696740","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
