2W8B
Crystal structure of processed TolB in complex with Pal
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0015031 | biological_process | protein transport |
A | 0016020 | cellular_component | membrane |
A | 0017038 | biological_process | protein import |
A | 0019904 | molecular_function | protein domain specific binding |
A | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
A | 0032153 | cellular_component | cell division site |
A | 0032991 | cellular_component | protein-containing complex |
A | 0042597 | cellular_component | periplasmic space |
A | 0043213 | biological_process | bacteriocin transport |
A | 0044877 | molecular_function | protein-containing complex binding |
A | 0051301 | biological_process | cell division |
A | 0071237 | biological_process | cellular response to bacteriocin |
A | 0090529 | biological_process | cell septum assembly |
A | 1905153 | biological_process | regulation of membrane invagination |
B | 0005515 | molecular_function | protein binding |
B | 0015031 | biological_process | protein transport |
B | 0016020 | cellular_component | membrane |
B | 0017038 | biological_process | protein import |
B | 0019904 | molecular_function | protein domain specific binding |
B | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
B | 0032153 | cellular_component | cell division site |
B | 0032991 | cellular_component | protein-containing complex |
B | 0042597 | cellular_component | periplasmic space |
B | 0043213 | biological_process | bacteriocin transport |
B | 0044877 | molecular_function | protein-containing complex binding |
B | 0051301 | biological_process | cell division |
B | 0071237 | biological_process | cellular response to bacteriocin |
B | 0090529 | biological_process | cell septum assembly |
B | 1905153 | biological_process | regulation of membrane invagination |
C | 0009279 | cellular_component | cell outer membrane |
C | 0016020 | cellular_component | membrane |
D | 0005515 | molecular_function | protein binding |
D | 0015031 | biological_process | protein transport |
D | 0016020 | cellular_component | membrane |
D | 0017038 | biological_process | protein import |
D | 0019904 | molecular_function | protein domain specific binding |
D | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
D | 0032153 | cellular_component | cell division site |
D | 0032991 | cellular_component | protein-containing complex |
D | 0042597 | cellular_component | periplasmic space |
D | 0043213 | biological_process | bacteriocin transport |
D | 0044877 | molecular_function | protein-containing complex binding |
D | 0051301 | biological_process | cell division |
D | 0071237 | biological_process | cellular response to bacteriocin |
D | 0090529 | biological_process | cell septum assembly |
D | 1905153 | biological_process | regulation of membrane invagination |
E | 0009279 | cellular_component | cell outer membrane |
E | 0016020 | cellular_component | membrane |
F | 0005515 | molecular_function | protein binding |
F | 0015031 | biological_process | protein transport |
F | 0016020 | cellular_component | membrane |
F | 0017038 | biological_process | protein import |
F | 0019904 | molecular_function | protein domain specific binding |
F | 0030288 | cellular_component | outer membrane-bounded periplasmic space |
F | 0032153 | cellular_component | cell division site |
F | 0032991 | cellular_component | protein-containing complex |
F | 0042597 | cellular_component | periplasmic space |
F | 0043213 | biological_process | bacteriocin transport |
F | 0044877 | molecular_function | protein-containing complex binding |
F | 0051301 | biological_process | cell division |
F | 0071237 | biological_process | cellular response to bacteriocin |
F | 0090529 | biological_process | cell septum assembly |
F | 1905153 | biological_process | regulation of membrane invagination |
G | 0009279 | cellular_component | cell outer membrane |
G | 0016020 | cellular_component | membrane |
H | 0009279 | cellular_component | cell outer membrane |
H | 0016020 | cellular_component | membrane |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE SO4 A 1431 |
Chain | Residue |
A | ASN64 |
A | SER65 |
A | PHE163 |
A | TYR187 |
A | MET388 |
A | TRP426 |
A | HOH2351 |
A | HOH2352 |
site_id | AC2 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 A 1432 |
Chain | Residue |
A | HOH2354 |
H | LYS130 |
H | ILE145 |
A | ARG244 |
site_id | AC3 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE SO4 A 1433 |
Chain | Residue |
A | GLY286 |
A | ARG287 |
site_id | AC4 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL A 1434 |
Chain | Residue |
A | GLU22 |
A | ARG24 |
A | ASN191 |
A | GLN192 |
site_id | AC5 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE ACT A 1435 |
Chain | Residue |
A | ASP150 |
A | GLY161 |
A | ALA162 |
A | PHE163 |
A | ARG164 |
A | THR165 |
A | TYR429 |
A | LEU430 |
site_id | AC6 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE SO4 B 1431 |
Chain | Residue |
B | ALA89 |
B | GLY286 |
B | ARG287 |
site_id | AC7 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE SO4 B 1432 |
Chain | Residue |
B | LYS213 |
B | ARG237 |
B | HOH2311 |
B | HOH2312 |
site_id | AC8 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE GOL B 1433 |
Chain | Residue |
B | SER65 |
B | PHE163 |
B | TYR187 |
B | ASN385 |
B | THR387 |
B | HOH2027 |
B | HOH2313 |
B | HOH2314 |
site_id | AC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL B 1434 |
Chain | Residue |
B | GLU22 |
B | ARG24 |
B | TYR190 |
B | ASN191 |
B | GLN192 |
site_id | BC1 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE ACT B 1435 |
Chain | Residue |
B | ASP150 |
B | GLY161 |
B | ALA162 |
B | PHE163 |
B | ARG164 |
B | THR165 |
B | TYR429 |
B | LEU430 |
site_id | BC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE GOL C 1174 |
Chain | Residue |
B | ARG244 |
C | LYS130 |
C | ILE143 |
C | SER144 |
C | ILE145 |
C | HOH2035 |
site_id | BC3 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE SO4 D 1431 |
Chain | Residue |
D | SER29 |
D | GLY30 |
D | VAL31 |
D | ASP32 |
D | HOH2315 |
D | HOH2316 |
site_id | BC4 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL D 1432 |
Chain | Residue |
D | GLU22 |
D | ARG24 |
D | GLY189 |
D | ASN191 |
D | GLN192 |
site_id | BC5 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE GOL D 1433 |
Chain | Residue |
D | ALA89 |
D | ASP285 |
D | GLY286 |
D | ARG287 |
D | GLN308 |
site_id | BC6 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE ACT D 1434 |
Chain | Residue |
D | ASP150 |
D | GLY161 |
D | ALA162 |
D | PHE163 |
D | ARG164 |
D | THR165 |
D | TYR429 |
D | LEU430 |
site_id | BC7 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 F 1431 |
Chain | Residue |
F | GLY56 |
F | ILE57 |
F | ARG142 |
F | TYR190 |
F | HOH2134 |
site_id | BC8 |
Number of Residues | 4 |
Details | BINDING SITE FOR RESIDUE GOL F 1432 |
Chain | Residue |
F | GLU22 |
F | ARG24 |
F | ASN191 |
F | GLN192 |
site_id | BC9 |
Number of Residues | 5 |
Details | BINDING SITE FOR RESIDUE SO4 G 1175 |
Chain | Residue |
D | LYS213 |
D | ARG237 |
G | LYS165 |
G | HOH2059 |
G | HOH2060 |
site_id | CC1 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE ACT H 1175 |
Chain | Residue |
H | ALA109 |
H | ASP110 |
H | LEU121 |
H | ARG125 |
H | ARG167 |
H | ASP76 |
Functional Information from PROSITE/UniProt
site_id | PS01068 |
Number of Residues | 45 |
Details | OMPA_1 OmpA-like domain. VeGhADer.GTpeYNisLGERRAnaVkmyLqgkg.VsadqIsivSyG |
Chain | Residue | Details |
C | VAL105-GLY149 |