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2VWK

Uracil Recognition in Archaeal DNA Polymerases Captured by X-ray Crystallography. V93Q polymerase variant

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003676molecular_functionnucleic acid binding
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0004527molecular_functionexonuclease activity
A0006260biological_processDNA replication
A0071897biological_processDNA biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A1774
ChainResidue
AARG460
ALYS487
ASO41776

site_idAC2
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SO4 A1775
ChainResidue
AARG606
AGLY607

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1776
ChainResidue
ASER407
ALYS487
AASN491
ANA1774

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1777
ChainResidue
ATYR7
APRO115
APHE116
AHOH2055

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A1778
ChainResidue
APRO435
AGLN436
AGLU628
ALYS632
AHIS633

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A1779
ChainResidue
ASER348
ATYR499
AHOH2056

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A1780
ChainResidue
AGLY386
AGLN436
ALYS584
AARG585

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 A1781
ChainResidue
AGLY387
ATYR388
ATHR541
ALYS591
ALYS592
AHOH2057

Functional Information from PROSITE/UniProt
site_idPS00116
Number of Residues9
DetailsDNA_POLYMERASE_B DNA polymerase family B signature. YADTDGFFA
ChainResidueDetails
ATYR538-ALA546

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PDB entries from 2024-07-24

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