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2VW2

Crystal structure of the NanB sialidase from Streptococcus pneumoniae

Functional Information from GO Data
ChainGOidnamespacecontents
A0004308molecular_functionexo-alpha-sialidase activity
A0005975biological_processcarbohydrate metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NHE A1000
ChainResidue
AARG245
ATYR653
ATRP674
AHOH2413
AHOH2792
AASP270
AILE326
AASP327
AASN352
ATYR489
ATYR509
AARG557
AARG619

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE NHE A1001
ChainResidue
AASN312
ALYS334
AALA497
ALYS499
AGLU658
AGOL1699
AHOH2793
AHOH2794
AHOH2796

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A1699
ChainResidue
ATYR250
ATHR251
AGLN494
ATHR657
ANHE1001
AHOH2583
AHOH2797

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsACT_SITE: Proton acceptor => ECO:0000250
ChainResidueDetails
AASP270

site_idSWS_FT_FI2
Number of Residues1
DetailsACT_SITE: ACT_SITE => ECO:0000255
ChainResidueDetails
AGLU541

site_idSWS_FT_FI3
Number of Residues1
DetailsACT_SITE: Nucleophile => ECO:0000250
ChainResidueDetails
ATYR653

site_idSWS_FT_FI4
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AARG245
AARG557
AARG619

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1sll
ChainResidueDetails
ATYR653
AGLU541
AASP270

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PDB entries from 2024-07-17

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