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2VW2

Crystal structure of the NanB sialidase from Streptococcus pneumoniae

Functional Information from GO Data
ChainGOidnamespacecontents
A0004308molecular_functionexo-alpha-sialidase activity
A0005975biological_processcarbohydrate metabolic process
Functional Information from PDB Data
site_idAC1
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NHE A1000
ChainResidue
AARG245
ATYR653
ATRP674
AHOH2413
AHOH2792
AASP270
AILE326
AASP327
AASN352
ATYR489
ATYR509
AARG557
AARG619

site_idAC2
Number of Residues9
DetailsBINDING SITE FOR RESIDUE NHE A1001
ChainResidue
AASN312
ALYS334
AALA497
ALYS499
AGLU658
AGOL1699
AHOH2793
AHOH2794
AHOH2796

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A1699
ChainResidue
ATYR250
ATHR251
AGLN494
ATHR657
ANHE1001
AHOH2583
AHOH2797

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues11
DetailsRepeat: {"description":"BNR 1"}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues11
DetailsRepeat: {"description":"BNR 2"}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues11
DetailsRepeat: {"description":"BNR 3"}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues11
DetailsRepeat: {"description":"BNR 4"}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsActive site: {"description":"Proton acceptor","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues1
DetailsActive site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues3
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1sll
ChainResidueDetails
ATYR653
AGLU541
AASP270

239803

PDB entries from 2025-08-06

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