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2VUG

The structure of an archaeal homodimeric RNA ligase

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
B0000166molecular_functionnucleotide binding
Functional Information from PDB Data
site_idAC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE ANP A 401
ChainResidue
AHIS70
AGLU147
APHE172
AVAL200
AILE230
ALYS232
ALYS241
AILE71
AARG73
AGLU93
AGLU94
ALYS95
AVAL96
AASN100
AARG115

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MPD A 501
ChainResidue
AGLN301
BLYS284
BPHE288
BLYS353

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE MPD A 502
ChainResidue
AVAL258
ALEU262
AARG362
ATYR364

site_idAC4
Number of Residues18
DetailsBINDING SITE FOR RESIDUE ANP B 401
ChainResidue
AASP382
BPHE68
BHIS70
BILE71
BARG73
BGLU93
BGLU94
BLYS95
BVAL96
BASN100
BARG115
BGLU147
BPHE172
BVAL200
BILE230
BLYS232
BLYS241
BHOH2007

site_idAC5
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MPD B 501
ChainResidue
BGLU89
BLYS205
BGLU345

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE MPD B 502
ChainResidue
BVAL157
BARG362
BTYR364

site_idAC7
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MPD B 503
ChainResidue
BTYR260
BGLU370

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MRD B 504
ChainResidue
BARG126
BASP129
BLYS325
BLYS353
BASP354

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MRD B 505
ChainResidue
BGLU219
BSER222
BILE249
BARG290
BGLU294

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PDB entries from 2025-06-18

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