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2VLZ

Crystal structure of peroxymyoglobin generated by cryoradiolytic reduction of myoglobin compound III

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0005344molecular_functionoxygen carrier activity
A0005737cellular_componentcytoplasm
A0015671biological_processoxygen transport
A0016491molecular_functionoxidoreductase activity
A0016528cellular_componentsarcoplasm
A0019430biological_processremoval of superoxide radicals
A0019825molecular_functionoxygen binding
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A0098809molecular_functionnitrite reductase activity
Functional Information from PDB Data
site_idAC1
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEM A 1154
ChainResidue
ATHR39
AILE99
ATYR103
ALEU104
AHIS113
AHIS116
AGLN128
APER1155
AHOH2152
AHOH2153
AHOH2154
ALYS42
AHOH2155
AHOH2156
AHOH2166
APHE43
ALYS45
AVAL68
ALEU89
ASER92
AHIS93
AHIS97

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PER A 1155
ChainResidue
APHE43
AHIS64
AVAL68
AHEM1154

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1156
ChainResidue
ATHR51
AGLU52
AHOH2158
AHOH2159

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SO4 A 1157
ChainResidue
AGLY1
AHOH2160
AHOH2161
AHOH2162

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 1158
ChainResidue
AARG31
ALYS45
AHIS113
ASER117
AHOH2070
AHOH2163
AHOH2165
AHOH2166

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEO A 1159
ChainResidue
AGLY1
ALEU2
ATRP7
ALEU137
AHOH2167

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PEO A 1160
ChainResidue
ALEU40
ALEU49
ALYS50
AHOH2063
AHOH2168

site_idAC8
Number of Residues4
DetailsBINDING SITE FOR RESIDUE PEO A 1161
ChainResidue
AARG31
ALYS96
AALA110
AHOH2169

site_idAC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE PEO A 1162
ChainResidue
AVAL67
AHIS116
AHIS119
AGLY121
AASP122
APHE123
AHOH2170

site_idBC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE PEO A 1163
ChainResidue
ALYS16
AALA19
AHIS24
AHIS119
AHOH2171
AHOH2173

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P02189, ECO:0000255|PROSITE-ProRule:PRU00238
ChainResidueDetails
AHIS64

site_idSWS_FT_FI2
Number of Residues1
DetailsBINDING: proximal binding residue => ECO:0000269|PubMed:10706294, ECO:0000269|PubMed:2359126, ECO:0000269|PubMed:7654702, ECO:0007744|PDB:1AZI, ECO:0007744|PDB:1BJE, ECO:0007744|PDB:1DWR, ECO:0007744|PDB:1DWS, ECO:0007744|PDB:1DWT, ECO:0007744|PDB:1GJN, ECO:0007744|PDB:1HSY, ECO:0007744|PDB:1NPF, ECO:0007744|PDB:1NPG, ECO:0007744|PDB:1NZ2, ECO:0007744|PDB:1NZ3, ECO:0007744|PDB:1NZ4, ECO:0007744|PDB:1NZ5, ECO:0007744|PDB:1RSE, ECO:0007744|PDB:1WLA, ECO:0007744|PDB:1XCH, ECO:0007744|PDB:1YMA, ECO:0007744|PDB:1YMB, ECO:0007744|PDB:2FRF, ECO:0007744|PDB:2FRI, ECO:0007744|PDB:2FRJ, ECO:0007744|PDB:2FRK, ECO:0007744|PDB:2NSR, ECO:0007744|PDB:2NSS, ECO:0007744|PDB:2V1E, ECO:0007744|PDB:2V1F, ECO:0007744|PDB:2V1G, ECO:0007744|PDB:2V1H, ECO:0007744|PDB:2V1I, ECO:0007744|PDB:2V1J, ECO:0007744|PDB:2V1K, ECO:0007744|PDB:2VLX, ECO:0007744|PDB:2VLY, ECO:0007744|PDB:2VLZ, ECO:0007744|PDB:2VM0, ECO:0007744|PDB:3HC9, ECO:0007744|PDB:3HEN, ECO:0007744|PDB:3HEO, ECO:0007744|PDB:3HEP, ECO:0007744|PDB:3LR7, ECO:0007744|PDB:3LR9, ECO:0007744|PDB:3RJ6, ECO:0007744|PDB:3VM9, ECO:0007744|PDB:3WYO, ECO:0007744|PDB:4DC7, ECO:0007744|PDB:4DC8, ECO:0007744|PDB:4NS2
ChainResidueDetails
AHIS93

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:Q9QZ76
ChainResidueDetails
ASER3

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PDB entries from 2024-10-09

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